Gene : Glyma.16G063000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  630
Name:  ? Glyma.16G063000 Secondary Identifier:  ? PAC:30560431
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G063000 0.5kb upstream 0.5kb upstream 7218 true Chr16: 6181896-6189113 Glycine max
Glyma.16G063000 0.5kb upstream 0.5kb upstream 500 false Chr16: 6181896-6182395 Glycine max
Glyma.16G063000 0.5kb downstream 0.5kb downstream 7218 true Chr16: 6182396-6189613 Glycine max
Glyma.16G063000 0.5kb downstream 0.5kb downstream 500 false Chr16: 6189114-6189613 Glycine max
Glyma.16G063000 1.0kb upstream 1.0kb upstream 7718 true Chr16: 6181396-6189113 Glycine max
Glyma.16G063000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6181396-6182395 Glycine max
Glyma.16G063000 1.0kb downstream 1.0kb downstream 7718 true Chr16: 6182396-6190113 Glycine max
Glyma.16G063000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6189114-6190113 Glycine max
Glyma.16G063000 2.0kb upstream 2.0kb upstream 8718 true Chr16: 6180396-6189113 Glycine max
Glyma.16G063000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6180396-6182395 Glycine max
Glyma.16G063000 2.0kb downstream 2.0kb downstream 8718 true Chr16: 6182396-6191113 Glycine max
Glyma.16G063000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6189114-6191113 Glycine max
Glyma.16G063000 5.0kb upstream 5.0kb upstream 11718 true Chr16: 6177396-6189113 Glycine max
Glyma.16G063000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6177396-6182395 Glycine max
Glyma.16G063000 5.0kb downstream 5.0kb downstream 11718 true Chr16: 6182396-6194113 Glycine max
Glyma.16G063000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6189114-6194113 Glycine max
Glyma.16G063000 10.0kb upstream 10.0kb upstream 16718 true Chr16: 6172396-6189113 Glycine max
Glyma.16G063000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6172396-6182395 Glycine max
Glyma.16G063000 10.0kb downstream 10.0kb downstream 16718 true Chr16: 6182396-6199113 Glycine max
Glyma.16G063000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6189114-6199113 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309617 5265 Fabidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.10189 0.0 21.9488   Low
cufflinks 9.01687 0.0 24.2981    
cufflinks 7.63316 0.0 20.7329   Low
cufflinks 9.40399 0.0 25.2861    
cufflinks 9.57392 0.0 25.7336    
cufflinks 14.5836 0.0 38.9096   High
cufflinks 12.4329 0.0 33.1982   High
cufflinks 10.9206 0.0 29.2226    
cufflinks 9.61103 0.0 25.8282    
cufflinks 2.972        
cufflinks 1.872       Low
cufflinks 2.784        
cufflinks 4.071       High
cufflinks 4.122       High
cufflinks 1.943       Low
cufflinks 2.862        
cufflinks 2.141        
cufflinks 2.961        
cufflinks 3.293        
cufflinks 2.684        
cufflinks 2.093       Low
cufflinks 2.744        
cufflinks 2.994        
cufflinks 2.122       Low
cufflinks 2.783        
cufflinks 2.361        

0 Strain