Gene : Glyma.16G105500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  1055
Name:  ? Glyma.16G105500 Secondary Identifier:  ? PAC:30559867
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G105500 0.5kb upstream 0.5kb upstream 2533 true Chr16: 21371036-21373568 Glycine max
Glyma.16G105500 0.5kb upstream 0.5kb upstream 500 false Chr16: 21373069-21373568 Glycine max
Glyma.16G105500 0.5kb downstream 0.5kb downstream 2533 true Chr16: 21370536-21373068 Glycine max
Glyma.16G105500 0.5kb downstream 0.5kb downstream 500 false Chr16: 21370536-21371035 Glycine max
Glyma.16G105500 1.0kb upstream 1.0kb upstream 3033 true Chr16: 21371036-21374068 Glycine max
Glyma.16G105500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 21373069-21374068 Glycine max
Glyma.16G105500 1.0kb downstream 1.0kb downstream 3033 true Chr16: 21370036-21373068 Glycine max
Glyma.16G105500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 21370036-21371035 Glycine max
Glyma.16G105500 2.0kb upstream 2.0kb upstream 4033 true Chr16: 21371036-21375068 Glycine max
Glyma.16G105500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 21373069-21375068 Glycine max
Glyma.16G105500 2.0kb downstream 2.0kb downstream 4033 true Chr16: 21369036-21373068 Glycine max
Glyma.16G105500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 21369036-21371035 Glycine max
Glyma.16G105500 5.0kb upstream 5.0kb upstream 7033 true Chr16: 21371036-21378068 Glycine max
Glyma.16G105500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 21373069-21378068 Glycine max
Glyma.16G105500 5.0kb downstream 5.0kb downstream 7033 true Chr16: 21366036-21373068 Glycine max
Glyma.16G105500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 21366036-21371035 Glycine max
Glyma.16G105500 10.0kb upstream 10.0kb upstream 12033 true Chr16: 21371036-21383068 Glycine max
Glyma.16G105500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 21373069-21383068 Glycine max
Glyma.16G105500 10.0kb downstream 10.0kb downstream 12033 true Chr16: 21361036-21373068 Glycine max
Glyma.16G105500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 21361036-21371035 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253942 5265 Fabidae View MSA
124069812 5270 Rosid View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.318925 0.0 1.20199    
cufflinks 1.27293 0.0 4.39394    
cufflinks 0.0789052 0.0 0.314129 Low  
cufflinks 0.236192 0.0 0.901728    
cufflinks 0.0304535 0.0 0.127443 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.22977 0.0 22.5936   High
cufflinks 0.173277 0.0 0.67043 Low  
cufflinks 0.0698846 0.0 0.279782 Low  
cufflinks 0.212        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246        
cufflinks 0.016     Low Low
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.419        
cufflinks 0.007     Low Low
cufflinks 0.458        
cufflinks 1.208       High
cufflinks 0.665        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.493        
cufflinks 0.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.342        
cufflinks 0.012     Low Low

0 Strain