Gene : Glyma.16G106300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  1063
Name:  ? Glyma.16G106300 Secondary Identifier:  ? PAC:30561722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G106300 0.5kb upstream 0.5kb upstream 3286 true Chr16: 21494647-21497932 Glycine max
Glyma.16G106300 0.5kb upstream 0.5kb upstream 500 false Chr16: 21494647-21495146 Glycine max
Glyma.16G106300 0.5kb downstream 0.5kb downstream 3286 true Chr16: 21495147-21498432 Glycine max
Glyma.16G106300 0.5kb downstream 0.5kb downstream 500 false Chr16: 21497933-21498432 Glycine max
Glyma.16G106300 1.0kb upstream 1.0kb upstream 3786 true Chr16: 21494147-21497932 Glycine max
Glyma.16G106300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 21494147-21495146 Glycine max
Glyma.16G106300 1.0kb downstream 1.0kb downstream 3786 true Chr16: 21495147-21498932 Glycine max
Glyma.16G106300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 21497933-21498932 Glycine max
Glyma.16G106300 2.0kb upstream 2.0kb upstream 4786 true Chr16: 21493147-21497932 Glycine max
Glyma.16G106300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 21493147-21495146 Glycine max
Glyma.16G106300 2.0kb downstream 2.0kb downstream 4786 true Chr16: 21495147-21499932 Glycine max
Glyma.16G106300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 21497933-21499932 Glycine max
Glyma.16G106300 5.0kb upstream 5.0kb upstream 7786 true Chr16: 21490147-21497932 Glycine max
Glyma.16G106300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 21490147-21495146 Glycine max
Glyma.16G106300 5.0kb downstream 5.0kb downstream 7786 true Chr16: 21495147-21502932 Glycine max
Glyma.16G106300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 21497933-21502932 Glycine max
Glyma.16G106300 10.0kb upstream 10.0kb upstream 12786 true Chr16: 21485147-21497932 Glycine max
Glyma.16G106300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 21485147-21495146 Glycine max
Glyma.16G106300 10.0kb downstream 10.0kb downstream 12786 true Chr16: 21495147-21507932 Glycine max
Glyma.16G106300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 21497933-21507932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.285 0.0 419.871 High  
cufflinks 111.28 0.0 328.495 High  
cufflinks 68.8472 0.0 191.583 High Low
cufflinks 90.7501 0.0 261.395 High  
cufflinks 232.071 0.0 790.215 High High
cufflinks 148.133 0.0 459.48 High  
cufflinks 378.82 0.0 1463.46 High High
cufflinks 115.962 0.0 346.302 High  
cufflinks 135.176 0.0 413.048 High  
cufflinks 39.7     High  
cufflinks 14.982     High Low
cufflinks 30.587     High  
cufflinks 106.074     High High
cufflinks 161.172     High High
cufflinks 18.924     High Low
cufflinks 34.552     High  
cufflinks 31.16     High  
cufflinks 29.721     High  
cufflinks 44.309     High  
cufflinks 28.611     High  
cufflinks 25.6     High  
cufflinks 28.735     High  
cufflinks 37.074     High  
cufflinks 19.048     High Low
cufflinks 33.596     High  
cufflinks 31.563     High  

0 Strain