Gene : Glyma.16G107000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21576:SF7 - MAJOR FACILITATOR PROTEIN-RELATED Genomic Order:  1070
Name:  ? Glyma.16G107000 Secondary Identifier:  ? PAC:30558990
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G107000 0.5kb upstream 0.5kb upstream 5802 true Chr16: 21686607-21692408 Glycine max
Glyma.16G107000 0.5kb upstream 0.5kb upstream 500 false Chr16: 21691909-21692408 Glycine max
Glyma.16G107000 0.5kb downstream 0.5kb downstream 5802 true Chr16: 21686107-21691908 Glycine max
Glyma.16G107000 0.5kb downstream 0.5kb downstream 500 false Chr16: 21686107-21686606 Glycine max
Glyma.16G107000 1.0kb upstream 1.0kb upstream 6302 true Chr16: 21686607-21692908 Glycine max
Glyma.16G107000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 21691909-21692908 Glycine max
Glyma.16G107000 1.0kb downstream 1.0kb downstream 6302 true Chr16: 21685607-21691908 Glycine max
Glyma.16G107000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 21685607-21686606 Glycine max
Glyma.16G107000 2.0kb upstream 2.0kb upstream 7302 true Chr16: 21686607-21693908 Glycine max
Glyma.16G107000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 21691909-21693908 Glycine max
Glyma.16G107000 2.0kb downstream 2.0kb downstream 7302 true Chr16: 21684607-21691908 Glycine max
Glyma.16G107000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 21684607-21686606 Glycine max
Glyma.16G107000 5.0kb upstream 5.0kb upstream 10302 true Chr16: 21686607-21696908 Glycine max
Glyma.16G107000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 21691909-21696908 Glycine max
Glyma.16G107000 5.0kb downstream 5.0kb downstream 10302 true Chr16: 21681607-21691908 Glycine max
Glyma.16G107000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 21681607-21686606 Glycine max
Glyma.16G107000 10.0kb upstream 10.0kb upstream 15302 true Chr16: 21686607-21701908 Glycine max
Glyma.16G107000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 21691909-21701908 Glycine max
Glyma.16G107000 10.0kb downstream 10.0kb downstream 15302 true Chr16: 21676607-21691908 Glycine max
Glyma.16G107000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 21676607-21686606 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041179 5273 Angiosperm View MSA
122307804 5265 Fabidae View MSA
124065264 5270 Rosid View MSA
123747845 5271 Pentapetalae View MSA
122792896 5272 Eudicot View MSA
123429121 5275 Viridiplantae View MSA
121309810 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5654 0.0 5.03572    
cufflinks 0.728346 0.0 2.55639    
cufflinks 1.02981 0.0 3.48788    
cufflinks 0.528928 0.0 1.90066   Low
cufflinks 2.01143 0.0 6.23827   High
cufflinks 1.53759 0.0 4.94329    
cufflinks 1.29584 0.0 4.27944    
cufflinks 0.559736 0.0 2.00485   Low
cufflinks 1.46181 0.0 4.74218    
cufflinks 0.35        
cufflinks 11.952     High High
cufflinks 0.446        
cufflinks 0.902        
cufflinks 1.747        
cufflinks 34.583     High High
cufflinks 0.319        
cufflinks 7.369     High  
cufflinks 0.344        
cufflinks 0.419        
cufflinks 0.276        
cufflinks 27.109     High High
cufflinks 0.361        
cufflinks 0.465        
cufflinks 4.721        
cufflinks 0.349        
cufflinks 26.543     High High

0 Strain