Gene : Glyma.16G096300 G. max Wm82.a2.v1
Defline:  (1 of 17) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  963
Name:  ? Glyma.16G096300 Secondary Identifier:  ? PAC:30560655
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G096300 0.5kb upstream 0.5kb upstream 1607 true Chr16: 18249261-18250867 Glycine max
Glyma.16G096300 0.5kb upstream 0.5kb upstream 500 false Chr16: 18250368-18250867 Glycine max
Glyma.16G096300 0.5kb downstream 0.5kb downstream 1607 true Chr16: 18248761-18250367 Glycine max
Glyma.16G096300 0.5kb downstream 0.5kb downstream 500 false Chr16: 18248761-18249260 Glycine max
Glyma.16G096300 1.0kb upstream 1.0kb upstream 2107 true Chr16: 18249261-18251367 Glycine max
Glyma.16G096300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 18250368-18251367 Glycine max
Glyma.16G096300 1.0kb downstream 1.0kb downstream 2107 true Chr16: 18248261-18250367 Glycine max
Glyma.16G096300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 18248261-18249260 Glycine max
Glyma.16G096300 2.0kb upstream 2.0kb upstream 3107 true Chr16: 18249261-18252367 Glycine max
Glyma.16G096300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 18250368-18252367 Glycine max
Glyma.16G096300 2.0kb downstream 2.0kb downstream 3107 true Chr16: 18247261-18250367 Glycine max
Glyma.16G096300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 18247261-18249260 Glycine max
Glyma.16G096300 5.0kb upstream 5.0kb upstream 6107 true Chr16: 18249261-18255367 Glycine max
Glyma.16G096300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 18250368-18255367 Glycine max
Glyma.16G096300 5.0kb downstream 5.0kb downstream 6107 true Chr16: 18244261-18250367 Glycine max
Glyma.16G096300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 18244261-18249260 Glycine max
Glyma.16G096300 10.0kb upstream 10.0kb upstream 11107 true Chr16: 18249261-18260367 Glycine max
Glyma.16G096300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 18250368-18260367 Glycine max
Glyma.16G096300 10.0kb downstream 10.0kb downstream 11107 true Chr16: 18239261-18250367 Glycine max
Glyma.16G096300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 18239261-18249260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315406 5265 Fabidae View MSA
124074336 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.064     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain