Gene : Glyma.16G096700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937:SF161 - ACTIN-RELATED PROTEIN 8 Genomic Order:  967
Name:  ? Glyma.16G096700 Secondary Identifier:  ? PAC:30560523
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G096700 0.5kb upstream 0.5kb upstream 13963 true Chr16: 18676259-18690221 Glycine max
Glyma.16G096700 0.5kb upstream 0.5kb upstream 500 false Chr16: 18689722-18690221 Glycine max
Glyma.16G096700 0.5kb downstream 0.5kb downstream 13963 true Chr16: 18675759-18689721 Glycine max
Glyma.16G096700 0.5kb downstream 0.5kb downstream 500 false Chr16: 18675759-18676258 Glycine max
Glyma.16G096700 1.0kb upstream 1.0kb upstream 14463 true Chr16: 18676259-18690721 Glycine max
Glyma.16G096700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 18689722-18690721 Glycine max
Glyma.16G096700 1.0kb downstream 1.0kb downstream 14463 true Chr16: 18675259-18689721 Glycine max
Glyma.16G096700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 18675259-18676258 Glycine max
Glyma.16G096700 2.0kb upstream 2.0kb upstream 15463 true Chr16: 18676259-18691721 Glycine max
Glyma.16G096700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 18689722-18691721 Glycine max
Glyma.16G096700 2.0kb downstream 2.0kb downstream 15463 true Chr16: 18674259-18689721 Glycine max
Glyma.16G096700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 18674259-18676258 Glycine max
Glyma.16G096700 5.0kb upstream 5.0kb upstream 18463 true Chr16: 18676259-18694721 Glycine max
Glyma.16G096700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 18689722-18694721 Glycine max
Glyma.16G096700 5.0kb downstream 5.0kb downstream 18463 true Chr16: 18671259-18689721 Glycine max
Glyma.16G096700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 18671259-18676258 Glycine max
Glyma.16G096700 10.0kb upstream 10.0kb upstream 23463 true Chr16: 18676259-18699721 Glycine max
Glyma.16G096700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 18689722-18699721 Glycine max
Glyma.16G096700 10.0kb downstream 10.0kb downstream 23463 true Chr16: 18666259-18689721 Glycine max
Glyma.16G096700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 18666259-18676258 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314527 5265 Fabidae View MSA
124063232 5270 Rosid View MSA
123744572 5271 Pentapetalae View MSA
122792613 5272 Eudicot View MSA
122045785 5273 Angiosperm View MSA
121310502 5274 Embryophyte View MSA
123347970 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2906 0.0 33.0988    
cufflinks 7.26712 0.0 20.2944    
cufflinks 16.1723 0.0 43.2031   High
cufflinks 12.0229 0.0 32.3962    
cufflinks 8.68199 0.0 23.8375    
cufflinks 5.10856 0.0 14.8178   Low
cufflinks 8.0202 0.0 22.1824    
cufflinks 8.90457 0.0 24.4211    
cufflinks 10.048 0.0 27.3209    
cufflinks 0.61        
cufflinks 0.643        
cufflinks 1.437       High
cufflinks 0.472       Low
cufflinks 0.331       Low
cufflinks 1.186        
cufflinks 1.028        
cufflinks 0.436       Low
cufflinks 1.02        
cufflinks 1.036        
cufflinks 1.29       High
cufflinks 0.808        
cufflinks 1.288       High
cufflinks 1.007        
cufflinks 0.677        
cufflinks 1.117        
cufflinks 0.761        

0 Strain