Gene : Glyma.16G098800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Genomic Order:  988
Name:  ? Glyma.16G098800 Secondary Identifier:  ? PAC:30559833
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G098800 0.5kb upstream 0.5kb upstream 2254 true Chr16: 19050464-19052717 Glycine max
Glyma.16G098800 0.5kb upstream 0.5kb upstream 500 false Chr16: 19050464-19050963 Glycine max
Glyma.16G098800 0.5kb downstream 0.5kb downstream 2254 true Chr16: 19050964-19053217 Glycine max
Glyma.16G098800 0.5kb downstream 0.5kb downstream 500 false Chr16: 19052718-19053217 Glycine max
Glyma.16G098800 1.0kb upstream 1.0kb upstream 2754 true Chr16: 19049964-19052717 Glycine max
Glyma.16G098800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 19049964-19050963 Glycine max
Glyma.16G098800 1.0kb downstream 1.0kb downstream 2754 true Chr16: 19050964-19053717 Glycine max
Glyma.16G098800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 19052718-19053717 Glycine max
Glyma.16G098800 2.0kb upstream 2.0kb upstream 3754 true Chr16: 19048964-19052717 Glycine max
Glyma.16G098800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 19048964-19050963 Glycine max
Glyma.16G098800 2.0kb downstream 2.0kb downstream 3754 true Chr16: 19050964-19054717 Glycine max
Glyma.16G098800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 19052718-19054717 Glycine max
Glyma.16G098800 5.0kb upstream 5.0kb upstream 6754 true Chr16: 19045964-19052717 Glycine max
Glyma.16G098800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 19045964-19050963 Glycine max
Glyma.16G098800 5.0kb downstream 5.0kb downstream 6754 true Chr16: 19050964-19057717 Glycine max
Glyma.16G098800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 19052718-19057717 Glycine max
Glyma.16G098800 10.0kb upstream 10.0kb upstream 11754 true Chr16: 19040964-19052717 Glycine max
Glyma.16G098800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 19040964-19050963 Glycine max
Glyma.16G098800 10.0kb downstream 10.0kb downstream 11754 true Chr16: 19050964-19062717 Glycine max
Glyma.16G098800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 19052718-19062717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316121 5265 Fabidae View MSA
124074149 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.67094E-4 0.0 0.0055969 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0347982 0.0 0.154091 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00388603 0.0 0.0241407 Low  
cufflinks 3.62831E-4 0.0 0.00649187 Low  
cufflinks 8.73462E-5 0.0 0.00313822 Low Low
cufflinks 0.095     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.01     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain