Gene : Glyma.16G099100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR16056:SF2 - TESTIS-EXPRESSED SEQUENCE 10 PROTEIN HOMOLOG Genomic Order:  991
Name:  ? Glyma.16G099100 Secondary Identifier:  ? PAC:30560124
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G099100 0.5kb upstream 0.5kb upstream 15202 true Chr16: 19071570-19086771 Glycine max
Glyma.16G099100 0.5kb upstream 0.5kb upstream 500 false Chr16: 19071570-19072069 Glycine max
Glyma.16G099100 0.5kb downstream 0.5kb downstream 15202 true Chr16: 19072070-19087271 Glycine max
Glyma.16G099100 0.5kb downstream 0.5kb downstream 500 false Chr16: 19086772-19087271 Glycine max
Glyma.16G099100 1.0kb upstream 1.0kb upstream 15702 true Chr16: 19071070-19086771 Glycine max
Glyma.16G099100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 19071070-19072069 Glycine max
Glyma.16G099100 1.0kb downstream 1.0kb downstream 15702 true Chr16: 19072070-19087771 Glycine max
Glyma.16G099100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 19086772-19087771 Glycine max
Glyma.16G099100 2.0kb upstream 2.0kb upstream 16702 true Chr16: 19070070-19086771 Glycine max
Glyma.16G099100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 19070070-19072069 Glycine max
Glyma.16G099100 2.0kb downstream 2.0kb downstream 16702 true Chr16: 19072070-19088771 Glycine max
Glyma.16G099100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 19086772-19088771 Glycine max
Glyma.16G099100 5.0kb upstream 5.0kb upstream 19702 true Chr16: 19067070-19086771 Glycine max
Glyma.16G099100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 19067070-19072069 Glycine max
Glyma.16G099100 5.0kb downstream 5.0kb downstream 19702 true Chr16: 19072070-19091771 Glycine max
Glyma.16G099100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 19086772-19091771 Glycine max
Glyma.16G099100 10.0kb upstream 10.0kb upstream 24702 true Chr16: 19062070-19086771 Glycine max
Glyma.16G099100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 19062070-19072069 Glycine max
Glyma.16G099100 10.0kb downstream 10.0kb downstream 24702 true Chr16: 19072070-19096771 Glycine max
Glyma.16G099100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 19086772-19096771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
122300482 5265 Fabidae View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00599 0.0 19.3221   High
cufflinks 3.07808 0.0 13.6196    
cufflinks 3.34433 0.0 12.2468    
cufflinks 2.94188 0.0 11.5711    
cufflinks 4.51274 0.0 15.871    
cufflinks 2.40273 0.0 10.8422   Low
cufflinks 6.80391 0.0 25.0423   High
cufflinks 2.92227 0.0 12.7637    
cufflinks 3.08178 0.0 11.8768    
cufflinks 0.15       Low
cufflinks 0.212        
cufflinks 0.238        
cufflinks 0.325       High
cufflinks 0.434       High
cufflinks 0.283        
cufflinks 0.237        
cufflinks 0.177       Low
cufflinks 0.214        
cufflinks 0.283        
cufflinks 0.281        
cufflinks 0.191        
cufflinks 0.26        
cufflinks 0.231        
cufflinks 0.169       Low
cufflinks 0.253        
cufflinks 0.177       Low

0 Strain