Gene : Glyma.16G094900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33385:SF4 - PROTEIN XRI1 Genomic Order:  949
Name:  ? Glyma.16G094900 Secondary Identifier:  ? PAC:30559371
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G094900 0.5kb upstream 0.5kb upstream 4696 true Chr16: 16723651-16728346 Glycine max
Glyma.16G094900 0.5kb upstream 0.5kb upstream 500 false Chr16: 16727847-16728346 Glycine max
Glyma.16G094900 0.5kb downstream 0.5kb downstream 4696 true Chr16: 16723151-16727846 Glycine max
Glyma.16G094900 0.5kb downstream 0.5kb downstream 500 false Chr16: 16723151-16723650 Glycine max
Glyma.16G094900 1.0kb upstream 1.0kb upstream 5196 true Chr16: 16723651-16728846 Glycine max
Glyma.16G094900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 16727847-16728846 Glycine max
Glyma.16G094900 1.0kb downstream 1.0kb downstream 5196 true Chr16: 16722651-16727846 Glycine max
Glyma.16G094900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 16722651-16723650 Glycine max
Glyma.16G094900 2.0kb upstream 2.0kb upstream 6196 true Chr16: 16723651-16729846 Glycine max
Glyma.16G094900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 16727847-16729846 Glycine max
Glyma.16G094900 2.0kb downstream 2.0kb downstream 6196 true Chr16: 16721651-16727846 Glycine max
Glyma.16G094900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 16721651-16723650 Glycine max
Glyma.16G094900 5.0kb upstream 5.0kb upstream 9196 true Chr16: 16723651-16732846 Glycine max
Glyma.16G094900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 16727847-16732846 Glycine max
Glyma.16G094900 5.0kb downstream 5.0kb downstream 9196 true Chr16: 16718651-16727846 Glycine max
Glyma.16G094900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 16718651-16723650 Glycine max
Glyma.16G094900 10.0kb upstream 10.0kb upstream 14196 true Chr16: 16723651-16737846 Glycine max
Glyma.16G094900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 16727847-16737846 Glycine max
Glyma.16G094900 10.0kb downstream 10.0kb downstream 14196 true Chr16: 16713651-16727846 Glycine max
Glyma.16G094900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 16713651-16723650 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308542 5265 Fabidae View MSA
124050425 5270 Rosid View MSA
123749670 5271 Pentapetalae View MSA
122786653 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.385 0.0 49.1037    
cufflinks 9.89095 0.0 38.7258    
cufflinks 10.2089 0.0 51.8284    
cufflinks 6.42198 0.0 28.2003   Low
cufflinks 9.10745 0.0 41.1688    
cufflinks 12.6329 0.0 59.473   High
cufflinks 10.4927 0.0 45.3493    
cufflinks 6.85566 0.0 31.7878   Low
cufflinks 7.76192 0.0 31.9096    
cufflinks 0.519       Low
cufflinks 0.553       Low
cufflinks 0.827        
cufflinks 0.846        
cufflinks 1.024       High
cufflinks 0.615        
cufflinks 0.879        
cufflinks 0.426       Low
cufflinks 0.93        
cufflinks 1.016       High
cufflinks 0.94        
cufflinks 0.724        
cufflinks 0.979        
cufflinks 0.855        
cufflinks 0.672        
cufflinks 0.902        
cufflinks 0.507       Low

0 Strain