Gene : Glyma.16G088000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10516:SF279 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 Genomic Order:  880
Name:  ? Glyma.16G088000 Secondary Identifier:  ? PAC:30559657
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G088000 0.5kb upstream 0.5kb upstream 5954 true Chr16: 11140559-11146512 Glycine max
Glyma.16G088000 0.5kb upstream 0.5kb upstream 500 false Chr16: 11146013-11146512 Glycine max
Glyma.16G088000 0.5kb downstream 0.5kb downstream 5954 true Chr16: 11140059-11146012 Glycine max
Glyma.16G088000 0.5kb downstream 0.5kb downstream 500 false Chr16: 11140059-11140558 Glycine max
Glyma.16G088000 1.0kb upstream 1.0kb upstream 6454 true Chr16: 11140559-11147012 Glycine max
Glyma.16G088000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 11146013-11147012 Glycine max
Glyma.16G088000 1.0kb downstream 1.0kb downstream 6454 true Chr16: 11139559-11146012 Glycine max
Glyma.16G088000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 11139559-11140558 Glycine max
Glyma.16G088000 2.0kb upstream 2.0kb upstream 7454 true Chr16: 11140559-11148012 Glycine max
Glyma.16G088000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 11146013-11148012 Glycine max
Glyma.16G088000 2.0kb downstream 2.0kb downstream 7454 true Chr16: 11138559-11146012 Glycine max
Glyma.16G088000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 11138559-11140558 Glycine max
Glyma.16G088000 5.0kb upstream 5.0kb upstream 10454 true Chr16: 11140559-11151012 Glycine max
Glyma.16G088000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 11146013-11151012 Glycine max
Glyma.16G088000 5.0kb downstream 5.0kb downstream 10454 true Chr16: 11135559-11146012 Glycine max
Glyma.16G088000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 11135559-11140558 Glycine max
Glyma.16G088000 10.0kb upstream 10.0kb upstream 15454 true Chr16: 11140559-11156012 Glycine max
Glyma.16G088000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 11146013-11156012 Glycine max
Glyma.16G088000 10.0kb downstream 10.0kb downstream 15454 true Chr16: 11130559-11146012 Glycine max
Glyma.16G088000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 11130559-11140558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302998 5265 Fabidae View MSA
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58791 0.0 33.3406   Low
cufflinks 18.16 0.0 64.5521    
cufflinks 6.87662 0.0 24.5829   Low
cufflinks 25.721 0.0 95.9249 High  
cufflinks 26.1539 0.0 97.5446 High High
cufflinks 12.8085 0.0 44.5265    
cufflinks 22.4568 0.0 82.1232 High  
cufflinks 11.8185 0.0 40.8099    
cufflinks 23.4831 0.0 86.0531 High  
cufflinks 2.853        
cufflinks 2.029        
cufflinks 5.101        
cufflinks 8.358     High High
cufflinks 10.003     High High
cufflinks 2.174        
cufflinks 3.299        
cufflinks 1.277       Low
cufflinks 5.372        
cufflinks 5.159        
cufflinks 4.153        
cufflinks 1.44       Low
cufflinks 3.618        
cufflinks 3.833        
cufflinks 1.108       Low
cufflinks 3.796        
cufflinks 1.845        

0 Strain