Gene : Glyma.16G088300 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  883
Name:  ? Glyma.16G088300 Secondary Identifier:  ? PAC:30560701
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G088300 0.5kb upstream 0.5kb upstream 7065 true Chr16: 11184688-11191752 Glycine max
Glyma.16G088300 0.5kb upstream 0.5kb upstream 500 false Chr16: 11184688-11185187 Glycine max
Glyma.16G088300 0.5kb downstream 0.5kb downstream 7065 true Chr16: 11185188-11192252 Glycine max
Glyma.16G088300 0.5kb downstream 0.5kb downstream 500 false Chr16: 11191753-11192252 Glycine max
Glyma.16G088300 1.0kb upstream 1.0kb upstream 7565 true Chr16: 11184188-11191752 Glycine max
Glyma.16G088300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 11184188-11185187 Glycine max
Glyma.16G088300 1.0kb downstream 1.0kb downstream 7565 true Chr16: 11185188-11192752 Glycine max
Glyma.16G088300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 11191753-11192752 Glycine max
Glyma.16G088300 2.0kb upstream 2.0kb upstream 8565 true Chr16: 11183188-11191752 Glycine max
Glyma.16G088300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 11183188-11185187 Glycine max
Glyma.16G088300 2.0kb downstream 2.0kb downstream 8565 true Chr16: 11185188-11193752 Glycine max
Glyma.16G088300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 11191753-11193752 Glycine max
Glyma.16G088300 5.0kb upstream 5.0kb upstream 11565 true Chr16: 11180188-11191752 Glycine max
Glyma.16G088300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 11180188-11185187 Glycine max
Glyma.16G088300 5.0kb downstream 5.0kb downstream 11565 true Chr16: 11185188-11196752 Glycine max
Glyma.16G088300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 11191753-11196752 Glycine max
Glyma.16G088300 10.0kb upstream 10.0kb upstream 16565 true Chr16: 11175188-11191752 Glycine max
Glyma.16G088300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 11175188-11185187 Glycine max
Glyma.16G088300 10.0kb downstream 10.0kb downstream 16565 true Chr16: 11185188-11201752 Glycine max
Glyma.16G088300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 11191753-11201752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613238 5273 Angiosperm Singleton cluster - no MSA
122247136 5265 Fabidae Singleton cluster - no MSA
123990964 5270 Rosid Singleton cluster - no MSA
123565952 5271 Pentapetalae Singleton cluster - no MSA
122600714 5272 Eudicot Singleton cluster - no MSA
120885456 5274 Embryophyte Singleton cluster - no MSA
122926241 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0637 0.0 3.55191   High
cufflinks 0.641178 0.0 2.25588    
cufflinks 0.361701 0.0 1.3205    
cufflinks 0.226572 0.0 0.848283   Low
cufflinks 0.454914 0.0 1.64066    
cufflinks 0.164036 0.0 0.623408 Low Low
cufflinks 0.264978 0.0 0.985253    
cufflinks 0.862528 0.0 2.94881    
cufflinks 0.830322 0.0 2.8516    
cufflinks 0.234       Low
cufflinks 2.817       High
cufflinks 0.283       Low
cufflinks 0.239       Low
cufflinks 0.184       Low
cufflinks 1.687        
cufflinks 1.017        
cufflinks 0.573        
cufflinks 0.199       Low
cufflinks 0.73        
cufflinks 0.772        
cufflinks 3.717       High
cufflinks 0.996        
cufflinks 1.339        
cufflinks 3.129       High
cufflinks 0.836        
cufflinks 1.156        

0 Strain