Gene : Glyma.16G089600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10884 - NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3 Genomic Order:  896
Name:  ? Glyma.16G089600 Secondary Identifier:  ? PAC:30559860
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G089600 0.5kb upstream 0.5kb upstream 1476 true Chr16: 12039298-12040773 Glycine max
Glyma.16G089600 0.5kb upstream 0.5kb upstream 500 false Chr16: 12039298-12039797 Glycine max
Glyma.16G089600 0.5kb downstream 0.5kb downstream 1476 true Chr16: 12039798-12041273 Glycine max
Glyma.16G089600 0.5kb downstream 0.5kb downstream 500 false Chr16: 12040774-12041273 Glycine max
Glyma.16G089600 1.0kb upstream 1.0kb upstream 1976 true Chr16: 12038798-12040773 Glycine max
Glyma.16G089600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12038798-12039797 Glycine max
Glyma.16G089600 1.0kb downstream 1.0kb downstream 1976 true Chr16: 12039798-12041773 Glycine max
Glyma.16G089600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12040774-12041773 Glycine max
Glyma.16G089600 2.0kb upstream 2.0kb upstream 2976 true Chr16: 12037798-12040773 Glycine max
Glyma.16G089600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12037798-12039797 Glycine max
Glyma.16G089600 2.0kb downstream 2.0kb downstream 2976 true Chr16: 12039798-12042773 Glycine max
Glyma.16G089600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12040774-12042773 Glycine max
Glyma.16G089600 5.0kb upstream 5.0kb upstream 5976 true Chr16: 12034798-12040773 Glycine max
Glyma.16G089600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12034798-12039797 Glycine max
Glyma.16G089600 5.0kb downstream 5.0kb downstream 5976 true Chr16: 12039798-12045773 Glycine max
Glyma.16G089600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12040774-12045773 Glycine max
Glyma.16G089600 10.0kb upstream 10.0kb upstream 10976 true Chr16: 12029798-12040773 Glycine max
Glyma.16G089600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12029798-12039797 Glycine max
Glyma.16G089600 10.0kb downstream 10.0kb downstream 10976 true Chr16: 12039798-12050773 Glycine max
Glyma.16G089600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12040774-12050773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615490 5273 Angiosperm View MSA
122250486 5265 Fabidae View MSA
123993664 5270 Rosid View MSA
123568411 5271 Pentapetalae View MSA
122603156 5272 Eudicot View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.03     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.128       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain