Gene : Glyma.16G090500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF07897//PF16135 - Ethylene-responsive binding factor-associated repression (EAR) // TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  905
Name:  ? Glyma.16G090500 Secondary Identifier:  ? PAC:30561085
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G090500 0.5kb upstream 0.5kb upstream 3480 true Chr16: 13050354-13053833 Glycine max
Glyma.16G090500 0.5kb upstream 0.5kb upstream 500 false Chr16: 13050354-13050853 Glycine max
Glyma.16G090500 0.5kb downstream 0.5kb downstream 3480 true Chr16: 13050854-13054333 Glycine max
Glyma.16G090500 0.5kb downstream 0.5kb downstream 500 false Chr16: 13053834-13054333 Glycine max
Glyma.16G090500 1.0kb upstream 1.0kb upstream 3980 true Chr16: 13049854-13053833 Glycine max
Glyma.16G090500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 13049854-13050853 Glycine max
Glyma.16G090500 1.0kb downstream 1.0kb downstream 3980 true Chr16: 13050854-13054833 Glycine max
Glyma.16G090500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 13053834-13054833 Glycine max
Glyma.16G090500 2.0kb upstream 2.0kb upstream 4980 true Chr16: 13048854-13053833 Glycine max
Glyma.16G090500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 13048854-13050853 Glycine max
Glyma.16G090500 2.0kb downstream 2.0kb downstream 4980 true Chr16: 13050854-13055833 Glycine max
Glyma.16G090500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 13053834-13055833 Glycine max
Glyma.16G090500 5.0kb upstream 5.0kb upstream 7980 true Chr16: 13045854-13053833 Glycine max
Glyma.16G090500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 13045854-13050853 Glycine max
Glyma.16G090500 5.0kb downstream 5.0kb downstream 7980 true Chr16: 13050854-13058833 Glycine max
Glyma.16G090500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 13053834-13058833 Glycine max
Glyma.16G090500 10.0kb upstream 10.0kb upstream 12980 true Chr16: 13040854-13053833 Glycine max
Glyma.16G090500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 13040854-13050853 Glycine max
Glyma.16G090500 10.0kb downstream 10.0kb downstream 12980 true Chr16: 13050854-13063833 Glycine max
Glyma.16G090500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 13053834-13063833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301661 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.229267 0.0 0.884198    
cufflinks 0.345219 0.0 1.30958    
cufflinks 4.62608 0.0 13.9086   High
cufflinks 1.99078 0.0 6.69121    
cufflinks 0.352427 0.0 1.33177    
cufflinks 0.826256 0.0 2.99309    
cufflinks 17.3066 0.0 46.2469   High
cufflinks 0.204154 0.0 0.792226 Low  
cufflinks 0.0433366 0.0 0.179389 Low Low
cufflinks 0.044     Low  
cufflinks 0.319       High
cufflinks 0.592       High
cufflinks 0.187        
cufflinks 0.083        
cufflinks 0.082        
cufflinks 0.221        
cufflinks 0.035     Low Low
cufflinks 0.57       High
cufflinks 0.166        
cufflinks 0.036     Low Low
cufflinks 0.072        
cufflinks 0.052     Low  
cufflinks 0.011     Low Low
cufflinks 0.176        
cufflinks 0.158        
cufflinks 0.118        

0 Strain