Gene : Glyma.16G090700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Genomic Order:  907
Name:  ? Glyma.16G090700 Secondary Identifier:  ? PAC:30558943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G090700 0.5kb upstream 0.5kb upstream 5630 true Chr16: 13717954-13723583 Glycine max
Glyma.16G090700 0.5kb upstream 0.5kb upstream 500 false Chr16: 13717954-13718453 Glycine max
Glyma.16G090700 0.5kb downstream 0.5kb downstream 5630 true Chr16: 13718454-13724083 Glycine max
Glyma.16G090700 0.5kb downstream 0.5kb downstream 500 false Chr16: 13723584-13724083 Glycine max
Glyma.16G090700 1.0kb upstream 1.0kb upstream 6130 true Chr16: 13717454-13723583 Glycine max
Glyma.16G090700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 13717454-13718453 Glycine max
Glyma.16G090700 1.0kb downstream 1.0kb downstream 6130 true Chr16: 13718454-13724583 Glycine max
Glyma.16G090700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 13723584-13724583 Glycine max
Glyma.16G090700 2.0kb upstream 2.0kb upstream 7130 true Chr16: 13716454-13723583 Glycine max
Glyma.16G090700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 13716454-13718453 Glycine max
Glyma.16G090700 2.0kb downstream 2.0kb downstream 7130 true Chr16: 13718454-13725583 Glycine max
Glyma.16G090700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 13723584-13725583 Glycine max
Glyma.16G090700 5.0kb upstream 5.0kb upstream 10130 true Chr16: 13713454-13723583 Glycine max
Glyma.16G090700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 13713454-13718453 Glycine max
Glyma.16G090700 5.0kb downstream 5.0kb downstream 10130 true Chr16: 13718454-13728583 Glycine max
Glyma.16G090700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 13723584-13728583 Glycine max
Glyma.16G090700 10.0kb upstream 10.0kb upstream 15130 true Chr16: 13708454-13723583 Glycine max
Glyma.16G090700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 13708454-13718453 Glycine max
Glyma.16G090700 10.0kb downstream 10.0kb downstream 15130 true Chr16: 13718454-13733583 Glycine max
Glyma.16G090700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 13723584-13733583 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3562 0.0 43.7042    
cufflinks 9.43066 0.0 25.8306    
cufflinks 15.6946 0.0 41.9456    
cufflinks 7.31147 0.0 20.4217    
cufflinks 10.9252 0.0 29.6308    
cufflinks 60.2336 0.0 172.457 High High
cufflinks 4.27571 0.0 12.7907   Low
cufflinks 9.92295 0.0 27.0615    
cufflinks 13.1704 0.0 35.3958    
cufflinks 3.641        
cufflinks 14.122     High High
cufflinks 4.078        
cufflinks 7.008        
cufflinks 2.073       Low
cufflinks 3.447        
cufflinks 5.694        
cufflinks 14.335     High High
cufflinks 3.775        
cufflinks 4.238        
cufflinks 5.242        
cufflinks 12.966     High High
cufflinks 5.914        
cufflinks 5.019        
cufflinks 19.122     High High
cufflinks 5.316        
cufflinks 15.427     High High

0 Strain