Gene : Glyma.16G091200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12560:SF13 - LAG1 LONGEVITY ASSURANCE HOMOLOG 1-RELATED Genomic Order:  912
Name:  ? Glyma.16G091200 Secondary Identifier:  ? PAC:30559919
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G091200 0.5kb upstream 0.5kb upstream 9666 true Chr16: 14039055-14048720 Glycine max
Glyma.16G091200 0.5kb upstream 0.5kb upstream 500 false Chr16: 14048221-14048720 Glycine max
Glyma.16G091200 0.5kb downstream 0.5kb downstream 9666 true Chr16: 14038555-14048220 Glycine max
Glyma.16G091200 0.5kb downstream 0.5kb downstream 500 false Chr16: 14038555-14039054 Glycine max
Glyma.16G091200 1.0kb upstream 1.0kb upstream 10166 true Chr16: 14039055-14049220 Glycine max
Glyma.16G091200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 14048221-14049220 Glycine max
Glyma.16G091200 1.0kb downstream 1.0kb downstream 10166 true Chr16: 14038055-14048220 Glycine max
Glyma.16G091200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 14038055-14039054 Glycine max
Glyma.16G091200 2.0kb upstream 2.0kb upstream 11166 true Chr16: 14039055-14050220 Glycine max
Glyma.16G091200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 14048221-14050220 Glycine max
Glyma.16G091200 2.0kb downstream 2.0kb downstream 11166 true Chr16: 14037055-14048220 Glycine max
Glyma.16G091200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 14037055-14039054 Glycine max
Glyma.16G091200 5.0kb upstream 5.0kb upstream 14166 true Chr16: 14039055-14053220 Glycine max
Glyma.16G091200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 14048221-14053220 Glycine max
Glyma.16G091200 5.0kb downstream 5.0kb downstream 14166 true Chr16: 14034055-14048220 Glycine max
Glyma.16G091200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 14034055-14039054 Glycine max
Glyma.16G091200 10.0kb upstream 10.0kb upstream 19166 true Chr16: 14039055-14058220 Glycine max
Glyma.16G091200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 14048221-14058220 Glycine max
Glyma.16G091200 10.0kb downstream 10.0kb downstream 19166 true Chr16: 14029055-14048220 Glycine max
Glyma.16G091200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 14029055-14039054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300980 5265 Fabidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.2108 0.0 29.467    
cufflinks 5.18281 0.0 22.6385   Low
cufflinks 7.24673 0.0 26.5459    
cufflinks 7.10438 0.0 31.0641    
cufflinks 13.2699 0.0 56.5619    
cufflinks 21.4971 0.0 74.9831   High
cufflinks 5.05086 0.0 20.9922   Low
cufflinks 8.19112 0.0 32.2328    
cufflinks 11.3391 0.0 40.8555    
cufflinks 0.333        
cufflinks 0.251        
cufflinks 0.367        
cufflinks 0.792       High
cufflinks 0.81       High
cufflinks 0.208        
cufflinks 0.182       Low
cufflinks 0.329        
cufflinks 0.391        
cufflinks 0.292        
cufflinks 0.226        
cufflinks 0.292        
cufflinks 0.225        
cufflinks 0.162       Low
cufflinks 0.349        
cufflinks 0.198        
cufflinks 0.319        

0 Strain