Gene : Glyma.16G093600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  936
Name:  ? Glyma.16G093600 Secondary Identifier:  ? PAC:30560054
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G093600 0.5kb upstream 0.5kb upstream 1562 true Chr16: 15097779-15099340 Glycine max
Glyma.16G093600 0.5kb upstream 0.5kb upstream 500 false Chr16: 15098841-15099340 Glycine max
Glyma.16G093600 0.5kb downstream 0.5kb downstream 1562 true Chr16: 15097279-15098840 Glycine max
Glyma.16G093600 0.5kb downstream 0.5kb downstream 500 false Chr16: 15097279-15097778 Glycine max
Glyma.16G093600 1.0kb upstream 1.0kb upstream 2062 true Chr16: 15097779-15099840 Glycine max
Glyma.16G093600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 15098841-15099840 Glycine max
Glyma.16G093600 1.0kb downstream 1.0kb downstream 2062 true Chr16: 15096779-15098840 Glycine max
Glyma.16G093600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 15096779-15097778 Glycine max
Glyma.16G093600 2.0kb upstream 2.0kb upstream 3062 true Chr16: 15097779-15100840 Glycine max
Glyma.16G093600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 15098841-15100840 Glycine max
Glyma.16G093600 2.0kb downstream 2.0kb downstream 3062 true Chr16: 15095779-15098840 Glycine max
Glyma.16G093600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 15095779-15097778 Glycine max
Glyma.16G093600 5.0kb upstream 5.0kb upstream 6062 true Chr16: 15097779-15103840 Glycine max
Glyma.16G093600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 15098841-15103840 Glycine max
Glyma.16G093600 5.0kb downstream 5.0kb downstream 6062 true Chr16: 15092779-15098840 Glycine max
Glyma.16G093600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 15092779-15097778 Glycine max
Glyma.16G093600 10.0kb upstream 10.0kb upstream 11062 true Chr16: 15097779-15108840 Glycine max
Glyma.16G093600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 15098841-15108840 Glycine max
Glyma.16G093600 10.0kb downstream 10.0kb downstream 11062 true Chr16: 15087779-15098840 Glycine max
Glyma.16G093600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 15087779-15097778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302150 5265 Fabidae View MSA
124068067 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.55253 0.0 19.8035    
cufflinks 4.27177 0.0 13.7983    
cufflinks 3.19345 0.0 10.8408   Low
cufflinks 5.15478 0.0 16.1869    
cufflinks 5.11788 0.0 15.8649    
cufflinks 4.65929 0.0 14.7657    
cufflinks 11.5497 0.0 32.3518   High
cufflinks 6.61889 0.0 19.9798    
cufflinks 4.11375 0.0 13.2747    
cufflinks 3.993        
cufflinks 2.47       Low
cufflinks 3.066        
cufflinks 3.91        
cufflinks 3.537        
cufflinks 2.08       Low
cufflinks 4.482       High
cufflinks 2.545       Low
cufflinks 3.938        
cufflinks 3.807        
cufflinks 5.104       High
cufflinks 3.904        
cufflinks 4.183        
cufflinks 3.55        
cufflinks 3.799        
cufflinks 3.723        
cufflinks 2.498       Low

0 Strain