Gene : Glyma.16G138100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Genomic Order:  1381
Name:  ? Glyma.16G138100 Secondary Identifier:  ? PAC:30560398
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G138100 0.5kb upstream 0.5kb upstream 4009 true Chr16: 29519866-29523874 Glycine max
Glyma.16G138100 0.5kb upstream 0.5kb upstream 500 false Chr16: 29519866-29520365 Glycine max
Glyma.16G138100 0.5kb downstream 0.5kb downstream 4009 true Chr16: 29520366-29524374 Glycine max
Glyma.16G138100 0.5kb downstream 0.5kb downstream 500 false Chr16: 29523875-29524374 Glycine max
Glyma.16G138100 1.0kb upstream 1.0kb upstream 4509 true Chr16: 29519366-29523874 Glycine max
Glyma.16G138100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 29519366-29520365 Glycine max
Glyma.16G138100 1.0kb downstream 1.0kb downstream 4509 true Chr16: 29520366-29524874 Glycine max
Glyma.16G138100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 29523875-29524874 Glycine max
Glyma.16G138100 2.0kb upstream 2.0kb upstream 5509 true Chr16: 29518366-29523874 Glycine max
Glyma.16G138100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 29518366-29520365 Glycine max
Glyma.16G138100 2.0kb downstream 2.0kb downstream 5509 true Chr16: 29520366-29525874 Glycine max
Glyma.16G138100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 29523875-29525874 Glycine max
Glyma.16G138100 5.0kb upstream 5.0kb upstream 8509 true Chr16: 29515366-29523874 Glycine max
Glyma.16G138100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 29515366-29520365 Glycine max
Glyma.16G138100 5.0kb downstream 5.0kb downstream 8509 true Chr16: 29520366-29528874 Glycine max
Glyma.16G138100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 29523875-29528874 Glycine max
Glyma.16G138100 10.0kb upstream 10.0kb upstream 13509 true Chr16: 29510366-29523874 Glycine max
Glyma.16G138100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 29510366-29520365 Glycine max
Glyma.16G138100 10.0kb downstream 10.0kb downstream 13509 true Chr16: 29520366-29533874 Glycine max
Glyma.16G138100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 29523875-29533874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311486 5265 Fabidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.246 0.0 15.0325   Low
cufflinks 15.1692 0.0 40.5104   High
cufflinks 8.8023 0.0 24.0072    
cufflinks 10.457 0.0 28.2466    
cufflinks 8.94919 0.0 24.392    
cufflinks 7.47195 0.0 20.6391    
cufflinks 9.07854 0.0 24.7504    
cufflinks 15.259 0.0 40.7402   High
cufflinks 7.97312 0.0 21.9118    
cufflinks 6.615        
cufflinks 0.501       Low
cufflinks 4.78        
cufflinks 5.178        
cufflinks 6.395        
cufflinks 1.139       Low
cufflinks 4.396        
cufflinks 1.501        
cufflinks 6.481        
cufflinks 7.487     High High
cufflinks 3.793        
cufflinks 1.029       Low
cufflinks 4.775        
cufflinks 4.748        
cufflinks 1.03       Low
cufflinks 3.956        
cufflinks 1.224       Low

0 Strain