Gene : Glyma.16G138200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3437 - Anaphase-promoting complex (APC), subunit 10 Genomic Order:  1382
Name:  ? Glyma.16G138200 Secondary Identifier:  ? PAC:30561332
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G138200 0.5kb upstream 0.5kb upstream 3261 true Chr16: 29525781-29529041 Glycine max
Glyma.16G138200 0.5kb upstream 0.5kb upstream 500 false Chr16: 29528542-29529041 Glycine max
Glyma.16G138200 0.5kb downstream 0.5kb downstream 3261 true Chr16: 29525281-29528541 Glycine max
Glyma.16G138200 0.5kb downstream 0.5kb downstream 500 false Chr16: 29525281-29525780 Glycine max
Glyma.16G138200 1.0kb upstream 1.0kb upstream 3761 true Chr16: 29525781-29529541 Glycine max
Glyma.16G138200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 29528542-29529541 Glycine max
Glyma.16G138200 1.0kb downstream 1.0kb downstream 3761 true Chr16: 29524781-29528541 Glycine max
Glyma.16G138200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 29524781-29525780 Glycine max
Glyma.16G138200 2.0kb upstream 2.0kb upstream 4761 true Chr16: 29525781-29530541 Glycine max
Glyma.16G138200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 29528542-29530541 Glycine max
Glyma.16G138200 2.0kb downstream 2.0kb downstream 4761 true Chr16: 29523781-29528541 Glycine max
Glyma.16G138200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 29523781-29525780 Glycine max
Glyma.16G138200 5.0kb upstream 5.0kb upstream 7761 true Chr16: 29525781-29533541 Glycine max
Glyma.16G138200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 29528542-29533541 Glycine max
Glyma.16G138200 5.0kb downstream 5.0kb downstream 7761 true Chr16: 29520781-29528541 Glycine max
Glyma.16G138200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 29520781-29525780 Glycine max
Glyma.16G138200 10.0kb upstream 10.0kb upstream 12761 true Chr16: 29525781-29538541 Glycine max
Glyma.16G138200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 29528542-29538541 Glycine max
Glyma.16G138200 10.0kb downstream 10.0kb downstream 12761 true Chr16: 29515781-29528541 Glycine max
Glyma.16G138200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 29515781-29525780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307590 5265 Fabidae View MSA
124062531 5270 Rosid View MSA
123737229 5271 Pentapetalae View MSA
122786646 5272 Eudicot View MSA
122044398 5273 Angiosperm View MSA
121350033 5274 Embryophyte View MSA
123424736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9923 0.0 80.6749    
cufflinks 17.1597 0.0 82.8199    
cufflinks 48.3183 0.0 228.774 High High
cufflinks 19.8645 0.0 80.1661 High  
cufflinks 16.9127 0.0 82.5502    
cufflinks 25.1953 0.0 115.33 High  
cufflinks 13.118 0.0 61.3314   Low
cufflinks 26.0494 0.0 122.252 High  
cufflinks 17.3426 0.0 84.23    
cufflinks 1.328        
cufflinks 1.502        
cufflinks 3.119       High
cufflinks 1.573        
cufflinks 1.871        
cufflinks 0.785       Low
cufflinks 1.687        
cufflinks 1.058       Low
cufflinks 1.519        
cufflinks 1.682        
cufflinks 1.745        
cufflinks 1.465        
cufflinks 1.83        
cufflinks 1.54        
cufflinks 2.303       High
cufflinks 1.849        
cufflinks 1.23        

0 Strain