Gene : Glyma.16G129200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31161:SF6 - KINECTIN-RELATED PROTEIN Genomic Order:  1292
Name:  ? Glyma.16G129200 Secondary Identifier:  ? PAC:30561528
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G129200 0.5kb upstream 0.5kb upstream 8317 true Chr16: 28138165-28146481 Glycine max
Glyma.16G129200 0.5kb upstream 0.5kb upstream 500 false Chr16: 28138165-28138664 Glycine max
Glyma.16G129200 0.5kb downstream 0.5kb downstream 8317 true Chr16: 28138665-28146981 Glycine max
Glyma.16G129200 0.5kb downstream 0.5kb downstream 500 false Chr16: 28146482-28146981 Glycine max
Glyma.16G129200 1.0kb upstream 1.0kb upstream 8817 true Chr16: 28137665-28146481 Glycine max
Glyma.16G129200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28137665-28138664 Glycine max
Glyma.16G129200 1.0kb downstream 1.0kb downstream 8817 true Chr16: 28138665-28147481 Glycine max
Glyma.16G129200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28146482-28147481 Glycine max
Glyma.16G129200 2.0kb upstream 2.0kb upstream 9817 true Chr16: 28136665-28146481 Glycine max
Glyma.16G129200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28136665-28138664 Glycine max
Glyma.16G129200 2.0kb downstream 2.0kb downstream 9817 true Chr16: 28138665-28148481 Glycine max
Glyma.16G129200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28146482-28148481 Glycine max
Glyma.16G129200 5.0kb upstream 5.0kb upstream 12817 true Chr16: 28133665-28146481 Glycine max
Glyma.16G129200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28133665-28138664 Glycine max
Glyma.16G129200 5.0kb downstream 5.0kb downstream 12817 true Chr16: 28138665-28151481 Glycine max
Glyma.16G129200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28146482-28151481 Glycine max
Glyma.16G129200 10.0kb upstream 10.0kb upstream 17817 true Chr16: 28128665-28146481 Glycine max
Glyma.16G129200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28128665-28138664 Glycine max
Glyma.16G129200 10.0kb downstream 10.0kb downstream 17817 true Chr16: 28138665-28156481 Glycine max
Glyma.16G129200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28146482-28156481 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314136 5265 Fabidae View MSA
124067949 5270 Rosid View MSA
123741403 5271 Pentapetalae View MSA
122792089 5272 Eudicot View MSA
122046615 5273 Angiosperm View MSA
121343979 5274 Embryophyte View MSA
123379950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.181 0.0 47.3704    
cufflinks 14.275 0.0 57.7876    
cufflinks 18.0258 0.0 72.4491   High
cufflinks 12.9938 0.0 51.0473    
cufflinks 10.0963 0.0 35.8842   Low
cufflinks 19.2803 0.0 74.7394   High
cufflinks 12.3817 0.0 50.6128    
cufflinks 14.8115 0.0 60.4587    
cufflinks 13.4769 0.0 50.2714    
cufflinks 0.825       Low
cufflinks 2.969       High
cufflinks 1.323        
cufflinks 1.241        
cufflinks 1.236        
cufflinks 1.794        
cufflinks 1.527        
cufflinks 0.664       Low
cufflinks 1.5        
cufflinks 1.217        
cufflinks 2.158        
cufflinks 2.433       High
cufflinks 1.828        
cufflinks 1.031        
cufflinks 2.728       High
cufflinks 2.082        
cufflinks 1.122        

0 Strain