Gene : Glyma.16G129500 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.7.7.79 - tRNA(His) guanylyltransferase / Histidine tRNA guanylyltransferase Genomic Order:  1295
Name:  ? Glyma.16G129500 Secondary Identifier:  ? PAC:30559841
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G129500 0.5kb upstream 0.5kb upstream 1547 true Chr16: 28235589-28237135 Glycine max
Glyma.16G129500 0.5kb upstream 0.5kb upstream 500 false Chr16: 28235589-28236088 Glycine max
Glyma.16G129500 0.5kb downstream 0.5kb downstream 1547 true Chr16: 28236089-28237635 Glycine max
Glyma.16G129500 0.5kb downstream 0.5kb downstream 500 false Chr16: 28237136-28237635 Glycine max
Glyma.16G129500 1.0kb upstream 1.0kb upstream 2047 true Chr16: 28235089-28237135 Glycine max
Glyma.16G129500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28235089-28236088 Glycine max
Glyma.16G129500 1.0kb downstream 1.0kb downstream 2047 true Chr16: 28236089-28238135 Glycine max
Glyma.16G129500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28237136-28238135 Glycine max
Glyma.16G129500 2.0kb upstream 2.0kb upstream 3047 true Chr16: 28234089-28237135 Glycine max
Glyma.16G129500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28234089-28236088 Glycine max
Glyma.16G129500 2.0kb downstream 2.0kb downstream 3047 true Chr16: 28236089-28239135 Glycine max
Glyma.16G129500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28237136-28239135 Glycine max
Glyma.16G129500 5.0kb upstream 5.0kb upstream 6047 true Chr16: 28231089-28237135 Glycine max
Glyma.16G129500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28231089-28236088 Glycine max
Glyma.16G129500 5.0kb downstream 5.0kb downstream 6047 true Chr16: 28236089-28242135 Glycine max
Glyma.16G129500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28237136-28242135 Glycine max
Glyma.16G129500 10.0kb upstream 10.0kb upstream 11047 true Chr16: 28226089-28237135 Glycine max
Glyma.16G129500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28226089-28236088 Glycine max
Glyma.16G129500 10.0kb downstream 10.0kb downstream 11047 true Chr16: 28236089-28247135 Glycine max
Glyma.16G129500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28237136-28247135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247265 5265 Fabidae Singleton cluster - no MSA
124039851 5270 Rosid View MSA
123748870 5271 Pentapetalae View MSA
122795509 5272 Eudicot View MSA
122049753 5273 Angiosperm View MSA
121349209 5274 Embryophyte View MSA
123426197 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.96801E-5 0.0 0.00276249 Low Low
cufflinks 5.60124E-4 0.0 0.00837419 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.56454E-4 0.0 0.00997174 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.89745E-4 0.0 0.00781643 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain