Gene : Glyma.16G129700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13691:SF16 - 60S RIBOSOMAL PROTEIN L8 Genomic Order:  1297
Name:  ? Glyma.16G129700 Secondary Identifier:  ? PAC:30562132
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G129700 0.5kb upstream 0.5kb upstream 2398 true Chr16: 28274927-28277324 Glycine max
Glyma.16G129700 0.5kb upstream 0.5kb upstream 500 false Chr16: 28274927-28275426 Glycine max
Glyma.16G129700 0.5kb downstream 0.5kb downstream 2398 true Chr16: 28275427-28277824 Glycine max
Glyma.16G129700 0.5kb downstream 0.5kb downstream 500 false Chr16: 28277325-28277824 Glycine max
Glyma.16G129700 1.0kb upstream 1.0kb upstream 2898 true Chr16: 28274427-28277324 Glycine max
Glyma.16G129700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28274427-28275426 Glycine max
Glyma.16G129700 1.0kb downstream 1.0kb downstream 2898 true Chr16: 28275427-28278324 Glycine max
Glyma.16G129700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28277325-28278324 Glycine max
Glyma.16G129700 2.0kb upstream 2.0kb upstream 3898 true Chr16: 28273427-28277324 Glycine max
Glyma.16G129700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28273427-28275426 Glycine max
Glyma.16G129700 2.0kb downstream 2.0kb downstream 3898 true Chr16: 28275427-28279324 Glycine max
Glyma.16G129700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28277325-28279324 Glycine max
Glyma.16G129700 5.0kb upstream 5.0kb upstream 6898 true Chr16: 28270427-28277324 Glycine max
Glyma.16G129700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28270427-28275426 Glycine max
Glyma.16G129700 5.0kb downstream 5.0kb downstream 6898 true Chr16: 28275427-28282324 Glycine max
Glyma.16G129700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28277325-28282324 Glycine max
Glyma.16G129700 10.0kb upstream 10.0kb upstream 11898 true Chr16: 28265427-28277324 Glycine max
Glyma.16G129700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28265427-28275426 Glycine max
Glyma.16G129700 10.0kb downstream 10.0kb downstream 11898 true Chr16: 28275427-28287324 Glycine max
Glyma.16G129700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28277325-28287324 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312970 5265 Fabidae View MSA
124067986 5270 Rosid View MSA
123745881 5271 Pentapetalae View MSA
122789259 5272 Eudicot View MSA
122042559 5273 Angiosperm View MSA
121350897 5274 Embryophyte View MSA
123424033 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.7848 0.0 263.139 High  
cufflinks 114.749 0.0 337.673 High  
cufflinks 47.2744 0.0 127.341 High Low
cufflinks 80.5471 0.0 226.607 High  
cufflinks 203.36 0.0 670.213 High High
cufflinks 108.406 0.0 318.499 High  
cufflinks 171.99 0.0 546.439 High High
cufflinks 110.613 0.0 324.445 High  
cufflinks 101.01 0.0 293.314 High  
cufflinks 43.35     High  
cufflinks 13.77     High Low
cufflinks 27.405     High  
cufflinks 103.749     High High
cufflinks 137.311     High High
cufflinks 14.238     High Low
cufflinks 40.028     High  
cufflinks 30.274     High  
cufflinks 32.005     High  
cufflinks 58.513     High  
cufflinks 25.512     High  
cufflinks 20.406     High  
cufflinks 26.457     High  
cufflinks 43.338     High  
cufflinks 16.955     High Low
cufflinks 29.954     High  
cufflinks 29.487     High  

0 Strain