Gene : Glyma.16G129900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10657:SF4 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 Genomic Order:  1299
Name:  ? Glyma.16G129900 Secondary Identifier:  ? PAC:30560897
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G129900 0.5kb upstream 0.5kb upstream 2975 true Chr16: 28288617-28291591 Glycine max
Glyma.16G129900 0.5kb upstream 0.5kb upstream 500 false Chr16: 28288617-28289116 Glycine max
Glyma.16G129900 0.5kb downstream 0.5kb downstream 2975 true Chr16: 28289117-28292091 Glycine max
Glyma.16G129900 0.5kb downstream 0.5kb downstream 500 false Chr16: 28291592-28292091 Glycine max
Glyma.16G129900 1.0kb upstream 1.0kb upstream 3475 true Chr16: 28288117-28291591 Glycine max
Glyma.16G129900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28288117-28289116 Glycine max
Glyma.16G129900 1.0kb downstream 1.0kb downstream 3475 true Chr16: 28289117-28292591 Glycine max
Glyma.16G129900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28291592-28292591 Glycine max
Glyma.16G129900 2.0kb upstream 2.0kb upstream 4475 true Chr16: 28287117-28291591 Glycine max
Glyma.16G129900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28287117-28289116 Glycine max
Glyma.16G129900 2.0kb downstream 2.0kb downstream 4475 true Chr16: 28289117-28293591 Glycine max
Glyma.16G129900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28291592-28293591 Glycine max
Glyma.16G129900 5.0kb upstream 5.0kb upstream 7475 true Chr16: 28284117-28291591 Glycine max
Glyma.16G129900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28284117-28289116 Glycine max
Glyma.16G129900 5.0kb downstream 5.0kb downstream 7475 true Chr16: 28289117-28296591 Glycine max
Glyma.16G129900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28291592-28296591 Glycine max
Glyma.16G129900 10.0kb upstream 10.0kb upstream 12475 true Chr16: 28279117-28291591 Glycine max
Glyma.16G129900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28279117-28289116 Glycine max
Glyma.16G129900 10.0kb downstream 10.0kb downstream 12475 true Chr16: 28289117-28301591 Glycine max
Glyma.16G129900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28291592-28301591 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305373 5265 Fabidae View MSA
124061766 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.4436 0.0 175.886 High  
cufflinks 29.073 0.0 78.36 High Low
cufflinks 38.8258 0.0 103.779 High  
cufflinks 44.3026 0.0 118.197 High  
cufflinks 56.2567 0.0 150.681 High  
cufflinks 60.2682 0.0 161.568 High  
cufflinks 38.1353 0.0 101.882 High  
cufflinks 74.4758 0.0 201.364 High High
cufflinks 58.4297 0.0 156.477 High  
cufflinks 14.422     High  
cufflinks 12.672     High  
cufflinks 9.875     High  
cufflinks 13.256     High  
cufflinks 15.946     High High
cufflinks 20.465     High High
cufflinks 11.826     High  
cufflinks 12.412     High  
cufflinks 10.644     High  
cufflinks 6.392       Low
cufflinks 12.089     High  
cufflinks 13.882     High  
cufflinks 11.236     High  
cufflinks 9.904     High  
cufflinks 12.082     High  
cufflinks 11.285     High  
cufflinks 13.723     High  

0 Strain