Gene : Glyma.16G131800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23421:SF79 - BETA-GALACTOSIDASE 3 Genomic Order:  1318
Name:  ? Glyma.16G131800 Secondary Identifier:  ? PAC:30562290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G131800 0.5kb upstream 0.5kb upstream 6131 true Chr16: 28739094-28745224 Glycine max
Glyma.16G131800 0.5kb upstream 0.5kb upstream 500 false Chr16: 28739094-28739593 Glycine max
Glyma.16G131800 0.5kb downstream 0.5kb downstream 6131 true Chr16: 28739594-28745724 Glycine max
Glyma.16G131800 0.5kb downstream 0.5kb downstream 500 false Chr16: 28745225-28745724 Glycine max
Glyma.16G131800 1.0kb upstream 1.0kb upstream 6631 true Chr16: 28738594-28745224 Glycine max
Glyma.16G131800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28738594-28739593 Glycine max
Glyma.16G131800 1.0kb downstream 1.0kb downstream 6631 true Chr16: 28739594-28746224 Glycine max
Glyma.16G131800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28745225-28746224 Glycine max
Glyma.16G131800 2.0kb upstream 2.0kb upstream 7631 true Chr16: 28737594-28745224 Glycine max
Glyma.16G131800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28737594-28739593 Glycine max
Glyma.16G131800 2.0kb downstream 2.0kb downstream 7631 true Chr16: 28739594-28747224 Glycine max
Glyma.16G131800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28745225-28747224 Glycine max
Glyma.16G131800 5.0kb upstream 5.0kb upstream 10631 true Chr16: 28734594-28745224 Glycine max
Glyma.16G131800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28734594-28739593 Glycine max
Glyma.16G131800 5.0kb downstream 5.0kb downstream 10631 true Chr16: 28739594-28750224 Glycine max
Glyma.16G131800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28745225-28750224 Glycine max
Glyma.16G131800 10.0kb upstream 10.0kb upstream 15631 true Chr16: 28729594-28745224 Glycine max
Glyma.16G131800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28729594-28739593 Glycine max
Glyma.16G131800 10.0kb downstream 10.0kb downstream 15631 true Chr16: 28739594-28755224 Glycine max
Glyma.16G131800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28745225-28755224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310956 5265 Fabidae View MSA
124073116 5270 Rosid View MSA
123744970 5271 Pentapetalae View MSA
122787438 5272 Eudicot View MSA
122044679 5273 Angiosperm View MSA
121310326 5274 Embryophyte View MSA
123347842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.847298 0.0 2.8575   Low
cufflinks 7.02175 0.0 18.8146    
cufflinks 2.28843 0.0 6.71217    
cufflinks 31.5596 0.0 91.4223 High High
cufflinks 13.6229 0.0 36.6067    
cufflinks 2.7235 0.0 7.83459    
cufflinks 22.6833 0.0 63.1161 High  
cufflinks 34.1453 0.0 99.9782 High High
cufflinks 5.4737 0.0 14.8156    
cufflinks 16.531     High High
cufflinks 0.812       Low
cufflinks 4.995        
cufflinks 4.836        
cufflinks 9.389     High  
cufflinks 0.109       Low
cufflinks 8.453     High  
cufflinks 3.648        
cufflinks 20.688     High High
cufflinks 6.122        
cufflinks 6.61        
cufflinks 1.645        
cufflinks 7.857     High  
cufflinks 12.437     High  
cufflinks 0.521       Low
cufflinks 6.535        
cufflinks 2.431        

0 Strain