Gene : Glyma.16G118400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10677 - UBIQUILIN Genomic Order:  1184
Name:  ? Glyma.16G118400 Secondary Identifier:  ? PAC:30561850
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G118400 0.5kb upstream 0.5kb upstream 15379 true Chr16: 26356863-26372241 Glycine max
Glyma.16G118400 0.5kb upstream 0.5kb upstream 500 false Chr16: 26371742-26372241 Glycine max
Glyma.16G118400 0.5kb downstream 0.5kb downstream 15379 true Chr16: 26356363-26371741 Glycine max
Glyma.16G118400 0.5kb downstream 0.5kb downstream 500 false Chr16: 26356363-26356862 Glycine max
Glyma.16G118400 1.0kb upstream 1.0kb upstream 15879 true Chr16: 26356863-26372741 Glycine max
Glyma.16G118400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26371742-26372741 Glycine max
Glyma.16G118400 1.0kb downstream 1.0kb downstream 15879 true Chr16: 26355863-26371741 Glycine max
Glyma.16G118400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26355863-26356862 Glycine max
Glyma.16G118400 2.0kb upstream 2.0kb upstream 16879 true Chr16: 26356863-26373741 Glycine max
Glyma.16G118400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26371742-26373741 Glycine max
Glyma.16G118400 2.0kb downstream 2.0kb downstream 16879 true Chr16: 26354863-26371741 Glycine max
Glyma.16G118400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26354863-26356862 Glycine max
Glyma.16G118400 5.0kb upstream 5.0kb upstream 19879 true Chr16: 26356863-26376741 Glycine max
Glyma.16G118400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26371742-26376741 Glycine max
Glyma.16G118400 5.0kb downstream 5.0kb downstream 19879 true Chr16: 26351863-26371741 Glycine max
Glyma.16G118400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26351863-26356862 Glycine max
Glyma.16G118400 10.0kb upstream 10.0kb upstream 24879 true Chr16: 26356863-26381741 Glycine max
Glyma.16G118400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26371742-26381741 Glycine max
Glyma.16G118400 10.0kb downstream 10.0kb downstream 24879 true Chr16: 26346863-26371741 Glycine max
Glyma.16G118400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26346863-26356862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297142 5265 Fabidae View MSA
124065561 5270 Rosid View MSA
123740193 5271 Pentapetalae View MSA
122788711 5272 Eudicot View MSA
122045847 5273 Angiosperm View MSA
121343962 5274 Embryophyte View MSA
123426424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2358 0.0 110.874    
cufflinks 17.7587 0.0 85.6819   Low
cufflinks 23.0073 0.0 121.462 High  
cufflinks 20.956 0.0 108.557 High  
cufflinks 26.8096 0.0 145.074 High High
cufflinks 17.9401 0.0 81.1893   Low
cufflinks 22.5348 0.0 120.276 High  
cufflinks 18.1871 0.0 97.1924   Low
cufflinks 28.3433 0.0 155.113 High High
cufflinks 0.264       Low
cufflinks 0.693       High
cufflinks 0.399        
cufflinks 0.404        
cufflinks 0.481        
cufflinks 0.645       High
cufflinks 0.375        
cufflinks 0.28       Low
cufflinks 0.35        
cufflinks 0.404        
cufflinks 0.41        
cufflinks 0.584       High
cufflinks 0.397        
cufflinks 0.308       Low
cufflinks 0.547       High
cufflinks 0.396        
cufflinks 0.371        

0 Strain