Gene : Glyma.16G122800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12202:SF0 - PROTEIN F58B3.4 Genomic Order:  1228
Name:  ? Glyma.16G122800 Secondary Identifier:  ? PAC:30559579
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G122800 0.5kb upstream 0.5kb upstream 10868 true Chr16: 27178438-27189305 Glycine max
Glyma.16G122800 0.5kb upstream 0.5kb upstream 500 false Chr16: 27188806-27189305 Glycine max
Glyma.16G122800 0.5kb downstream 0.5kb downstream 10868 true Chr16: 27177938-27188805 Glycine max
Glyma.16G122800 0.5kb downstream 0.5kb downstream 500 false Chr16: 27177938-27178437 Glycine max
Glyma.16G122800 1.0kb upstream 1.0kb upstream 11368 true Chr16: 27178438-27189805 Glycine max
Glyma.16G122800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 27188806-27189805 Glycine max
Glyma.16G122800 1.0kb downstream 1.0kb downstream 11368 true Chr16: 27177438-27188805 Glycine max
Glyma.16G122800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 27177438-27178437 Glycine max
Glyma.16G122800 2.0kb upstream 2.0kb upstream 12368 true Chr16: 27178438-27190805 Glycine max
Glyma.16G122800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 27188806-27190805 Glycine max
Glyma.16G122800 2.0kb downstream 2.0kb downstream 12368 true Chr16: 27176438-27188805 Glycine max
Glyma.16G122800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 27176438-27178437 Glycine max
Glyma.16G122800 5.0kb upstream 5.0kb upstream 15368 true Chr16: 27178438-27193805 Glycine max
Glyma.16G122800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 27188806-27193805 Glycine max
Glyma.16G122800 5.0kb downstream 5.0kb downstream 15368 true Chr16: 27173438-27188805 Glycine max
Glyma.16G122800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 27173438-27178437 Glycine max
Glyma.16G122800 10.0kb upstream 10.0kb upstream 20368 true Chr16: 27178438-27198805 Glycine max
Glyma.16G122800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 27188806-27198805 Glycine max
Glyma.16G122800 10.0kb downstream 10.0kb downstream 20368 true Chr16: 27168438-27188805 Glycine max
Glyma.16G122800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 27168438-27178437 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299332 5265 Fabidae View MSA
124067821 5270 Rosid View MSA
123737392 5271 Pentapetalae View MSA
122788396 5272 Eudicot View MSA
122046385 5273 Angiosperm View MSA
121346233 5274 Embryophyte View MSA
123423804 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.41551 0.0 50.45    
cufflinks 5.41683 0.0 22.251    
cufflinks 3.47615 0.0 15.7911   Low
cufflinks 3.13459 0.0 33.416   Low
cufflinks 5.79853 0.0 24.2151   High
cufflinks 4.81519 0.0 24.2696    
cufflinks 6.13602 0.0 29.3841   High
cufflinks 3.44115 0.0 23.2159   Low
cufflinks 5.11163 0.0 28.8743    
cufflinks 0.365        
cufflinks 0.314        
cufflinks 0.561        
cufflinks 0.855       High
cufflinks 1.013       High
cufflinks 0.311       Low
cufflinks 0.439        
cufflinks 0.233       Low
cufflinks 0.564        
cufflinks 0.678       High
cufflinks 0.395        
cufflinks 0.367        
cufflinks 0.456        
cufflinks 0.52        
cufflinks 0.42        
cufflinks 0.415        
cufflinks 0.356        

0 Strain