Gene : Glyma.16G123700 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11165 - SKP1 Genomic Order:  1237
Name:  ? Glyma.16G123700 Secondary Identifier:  ? PAC:30560636
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G123700 0.5kb upstream 0.5kb upstream 2305 true Chr16: 27303655-27305959 Glycine max
Glyma.16G123700 0.5kb upstream 0.5kb upstream 500 false Chr16: 27305460-27305959 Glycine max
Glyma.16G123700 0.5kb downstream 0.5kb downstream 2305 true Chr16: 27303155-27305459 Glycine max
Glyma.16G123700 0.5kb downstream 0.5kb downstream 500 false Chr16: 27303155-27303654 Glycine max
Glyma.16G123700 1.0kb upstream 1.0kb upstream 2805 true Chr16: 27303655-27306459 Glycine max
Glyma.16G123700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 27305460-27306459 Glycine max
Glyma.16G123700 1.0kb downstream 1.0kb downstream 2805 true Chr16: 27302655-27305459 Glycine max
Glyma.16G123700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 27302655-27303654 Glycine max
Glyma.16G123700 2.0kb upstream 2.0kb upstream 3805 true Chr16: 27303655-27307459 Glycine max
Glyma.16G123700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 27305460-27307459 Glycine max
Glyma.16G123700 2.0kb downstream 2.0kb downstream 3805 true Chr16: 27301655-27305459 Glycine max
Glyma.16G123700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 27301655-27303654 Glycine max
Glyma.16G123700 5.0kb upstream 5.0kb upstream 6805 true Chr16: 27303655-27310459 Glycine max
Glyma.16G123700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 27305460-27310459 Glycine max
Glyma.16G123700 5.0kb downstream 5.0kb downstream 6805 true Chr16: 27298655-27305459 Glycine max
Glyma.16G123700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 27298655-27303654 Glycine max
Glyma.16G123700 10.0kb upstream 10.0kb upstream 11805 true Chr16: 27303655-27315459 Glycine max
Glyma.16G123700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 27305460-27315459 Glycine max
Glyma.16G123700 10.0kb downstream 10.0kb downstream 11805 true Chr16: 27293655-27305459 Glycine max
Glyma.16G123700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 27293655-27303654 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303733 5265 Fabidae View MSA
124067462 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4711 0.0 122.218 High Low
cufflinks 84.4272 0.0 237.417 High  
cufflinks 66.3258 0.0 182.088 High  
cufflinks 177.081 0.0 555.953 High High
cufflinks 75.6901 0.0 211.17 High  
cufflinks 116.733 0.0 342.451 High  
cufflinks 91.325 0.0 259.653 High  
cufflinks 111.607 0.0 325.659 High  
cufflinks 90.953 0.0 258.014 High  
cufflinks 49.572     High High
cufflinks 26.554     High Low
cufflinks 45.479     High High
cufflinks 47.08     High High
cufflinks 49.134     High High
cufflinks 30.202     High  
cufflinks 30.003     High  
cufflinks 38.102     High  
cufflinks 42.278     High  
cufflinks 51.221     High High
cufflinks 27.675     High Low
cufflinks 29.013     High  
cufflinks 29.081     High  
cufflinks 31.981     High  
cufflinks 28.429     High  
cufflinks 28.043     High  
cufflinks 34.252     High  

0 Strain