Gene : Glyma.16G111800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13954 - IRE1-RELATED Genomic Order:  1118
Name:  ? Glyma.16G111800 Secondary Identifier:  ? PAC:30561039
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G111800 0.5kb upstream 0.5kb upstream 11214 true Chr16: 24720965-24732178 Glycine max
Glyma.16G111800 0.5kb upstream 0.5kb upstream 500 false Chr16: 24731679-24732178 Glycine max
Glyma.16G111800 0.5kb downstream 0.5kb downstream 11214 true Chr16: 24720465-24731678 Glycine max
Glyma.16G111800 0.5kb downstream 0.5kb downstream 500 false Chr16: 24720465-24720964 Glycine max
Glyma.16G111800 1.0kb upstream 1.0kb upstream 11714 true Chr16: 24720965-24732678 Glycine max
Glyma.16G111800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 24731679-24732678 Glycine max
Glyma.16G111800 1.0kb downstream 1.0kb downstream 11714 true Chr16: 24719965-24731678 Glycine max
Glyma.16G111800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 24719965-24720964 Glycine max
Glyma.16G111800 2.0kb upstream 2.0kb upstream 12714 true Chr16: 24720965-24733678 Glycine max
Glyma.16G111800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 24731679-24733678 Glycine max
Glyma.16G111800 2.0kb downstream 2.0kb downstream 12714 true Chr16: 24718965-24731678 Glycine max
Glyma.16G111800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 24718965-24720964 Glycine max
Glyma.16G111800 5.0kb upstream 5.0kb upstream 15714 true Chr16: 24720965-24736678 Glycine max
Glyma.16G111800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 24731679-24736678 Glycine max
Glyma.16G111800 5.0kb downstream 5.0kb downstream 15714 true Chr16: 24715965-24731678 Glycine max
Glyma.16G111800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 24715965-24720964 Glycine max
Glyma.16G111800 10.0kb upstream 10.0kb upstream 20714 true Chr16: 24720965-24741678 Glycine max
Glyma.16G111800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 24731679-24741678 Glycine max
Glyma.16G111800 10.0kb downstream 10.0kb downstream 20714 true Chr16: 24710965-24731678 Glycine max
Glyma.16G111800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 24710965-24720964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.110842 0.0 0.42998 Low  
cufflinks 0.120995 0.0 0.467253 Low  
cufflinks 0.199579 0.0 0.752684 Low  
cufflinks 0.0966776 0.0 0.376746 Low  
cufflinks 0.27018 0.0 1.00758   High
cufflinks 0.0728854 0.0 0.287175 Low Low
cufflinks 0.133868 0.0 0.515389 Low  
cufflinks 0.0615875 0.0 0.244045 Low Low
cufflinks 0.186596 0.0 0.706971 Low  
cufflinks 0.107        
cufflinks 0.067        
cufflinks 0.099     Low  
cufflinks 0.157        
cufflinks 0.019     Low Low
cufflinks 0.037     Low Low
cufflinks 0.096     Low  
cufflinks 0.318       High
cufflinks 0.158        
cufflinks 0.042     Low Low
cufflinks 0.072     Low  
cufflinks 0.055     Low  
cufflinks 0.102        
cufflinks 0.049     Low  
cufflinks 0.112        
cufflinks 0.068     Low  
cufflinks 0.183       High

0 Strain