Gene : Glyma.16G112900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14374 - FOIE GRAS Genomic Order:  1129
Name:  ? Glyma.16G112900 Secondary Identifier:  ? PAC:30561669
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G112900 0.5kb upstream 0.5kb upstream 8790 true Chr16: 25064625-25073414 Glycine max
Glyma.16G112900 0.5kb upstream 0.5kb upstream 500 false Chr16: 25072915-25073414 Glycine max
Glyma.16G112900 0.5kb downstream 0.5kb downstream 8790 true Chr16: 25064125-25072914 Glycine max
Glyma.16G112900 0.5kb downstream 0.5kb downstream 500 false Chr16: 25064125-25064624 Glycine max
Glyma.16G112900 1.0kb upstream 1.0kb upstream 9290 true Chr16: 25064625-25073914 Glycine max
Glyma.16G112900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 25072915-25073914 Glycine max
Glyma.16G112900 1.0kb downstream 1.0kb downstream 9290 true Chr16: 25063625-25072914 Glycine max
Glyma.16G112900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 25063625-25064624 Glycine max
Glyma.16G112900 2.0kb upstream 2.0kb upstream 10290 true Chr16: 25064625-25074914 Glycine max
Glyma.16G112900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 25072915-25074914 Glycine max
Glyma.16G112900 2.0kb downstream 2.0kb downstream 10290 true Chr16: 25062625-25072914 Glycine max
Glyma.16G112900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 25062625-25064624 Glycine max
Glyma.16G112900 5.0kb upstream 5.0kb upstream 13290 true Chr16: 25064625-25077914 Glycine max
Glyma.16G112900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 25072915-25077914 Glycine max
Glyma.16G112900 5.0kb downstream 5.0kb downstream 13290 true Chr16: 25059625-25072914 Glycine max
Glyma.16G112900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 25059625-25064624 Glycine max
Glyma.16G112900 10.0kb upstream 10.0kb upstream 18290 true Chr16: 25064625-25082914 Glycine max
Glyma.16G112900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 25072915-25082914 Glycine max
Glyma.16G112900 10.0kb downstream 10.0kb downstream 18290 true Chr16: 25054625-25072914 Glycine max
Glyma.16G112900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 25054625-25064624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305098 5265 Fabidae View MSA
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.11751 0.0 18.9906    
cufflinks 6.47051 0.0 17.2794    
cufflinks 5.3747 0.0 14.4115   Low
cufflinks 6.96287 0.0 18.5795    
cufflinks 9.56699 0.0 25.6125   High
cufflinks 6.50362 0.0 17.3647    
cufflinks 7.08691 0.0 18.9099    
cufflinks 7.52718 0.0 20.0823    
cufflinks 6.87039 0.0 18.3338    
cufflinks 6.263        
cufflinks 1.776       Low
cufflinks 3.961        
cufflinks 6.389        
cufflinks 7.851     High High
cufflinks 3.26        
cufflinks 5.883        
cufflinks 2.12       Low
cufflinks 6.452        
cufflinks 6.403        
cufflinks 4.898        
cufflinks 3.448        
cufflinks 5.441        
cufflinks 5.811        
cufflinks 2.837       Low
cufflinks 5.06        
cufflinks 3.832        

0 Strain