Gene : Glyma.16G163800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14154//PTHR14154:SF12 - UPF0041 BRAIN PROTEIN 44-RELATED Genomic Order:  1638
Name:  ? Glyma.16G163800 Secondary Identifier:  ? PAC:30559879
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G163800 0.5kb upstream 0.5kb upstream 2294 true Chr16: 32280595-32282888 Glycine max
Glyma.16G163800 0.5kb upstream 0.5kb upstream 500 false Chr16: 32280595-32281094 Glycine max
Glyma.16G163800 0.5kb downstream 0.5kb downstream 2294 true Chr16: 32281095-32283388 Glycine max
Glyma.16G163800 0.5kb downstream 0.5kb downstream 500 false Chr16: 32282889-32283388 Glycine max
Glyma.16G163800 1.0kb upstream 1.0kb upstream 2794 true Chr16: 32280095-32282888 Glycine max
Glyma.16G163800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32280095-32281094 Glycine max
Glyma.16G163800 1.0kb downstream 1.0kb downstream 2794 true Chr16: 32281095-32283888 Glycine max
Glyma.16G163800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32282889-32283888 Glycine max
Glyma.16G163800 2.0kb upstream 2.0kb upstream 3794 true Chr16: 32279095-32282888 Glycine max
Glyma.16G163800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32279095-32281094 Glycine max
Glyma.16G163800 2.0kb downstream 2.0kb downstream 3794 true Chr16: 32281095-32284888 Glycine max
Glyma.16G163800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32282889-32284888 Glycine max
Glyma.16G163800 5.0kb upstream 5.0kb upstream 6794 true Chr16: 32276095-32282888 Glycine max
Glyma.16G163800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32276095-32281094 Glycine max
Glyma.16G163800 5.0kb downstream 5.0kb downstream 6794 true Chr16: 32281095-32287888 Glycine max
Glyma.16G163800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32282889-32287888 Glycine max
Glyma.16G163800 10.0kb upstream 10.0kb upstream 11794 true Chr16: 32271095-32282888 Glycine max
Glyma.16G163800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32271095-32281094 Glycine max
Glyma.16G163800 10.0kb downstream 10.0kb downstream 11794 true Chr16: 32281095-32292888 Glycine max
Glyma.16G163800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32282889-32292888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310555 5265 Fabidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58855 0.0 28.0631    
cufflinks 15.2185 0.0 42.1957   High
cufflinks 4.75086 0.0 15.2374    
cufflinks 7.37459 0.0 22.2536    
cufflinks 3.00869 0.0 10.2979    
cufflinks 2.93029 0.0 10.0441    
cufflinks 2.46681 0.0 8.5967   Low
cufflinks 7.02046 0.0 21.3033    
cufflinks 3.17251 0.0 10.7716    
cufflinks 7.344        
cufflinks 12.128     High  
cufflinks 3.433        
cufflinks 1.023       Low
cufflinks 0.535       Low
cufflinks 5.802     High  
cufflinks 20.962     High  
cufflinks 0.889       Low
cufflinks 4.385        
cufflinks 8.109     High  
cufflinks 23.243     High High
cufflinks 12.485     High  
cufflinks 20.8     High  
cufflinks 13.441     High  
cufflinks 7.619     High  
cufflinks 25.764     High High
cufflinks 6.664     High  

0 Strain