Gene : Glyma.16G164700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12388//PTHR12388:SF2 - MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE Genomic Order:  1647
Name:  ? Glyma.16G164700 Secondary Identifier:  ? PAC:30561184
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G164700 0.5kb upstream 0.5kb upstream 6394 true Chr16: 32360277-32366670 Glycine max
Glyma.16G164700 0.5kb upstream 0.5kb upstream 500 false Chr16: 32360277-32360776 Glycine max
Glyma.16G164700 0.5kb downstream 0.5kb downstream 6394 true Chr16: 32360777-32367170 Glycine max
Glyma.16G164700 0.5kb downstream 0.5kb downstream 500 false Chr16: 32366671-32367170 Glycine max
Glyma.16G164700 1.0kb upstream 1.0kb upstream 6894 true Chr16: 32359777-32366670 Glycine max
Glyma.16G164700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32359777-32360776 Glycine max
Glyma.16G164700 1.0kb downstream 1.0kb downstream 6894 true Chr16: 32360777-32367670 Glycine max
Glyma.16G164700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32366671-32367670 Glycine max
Glyma.16G164700 2.0kb upstream 2.0kb upstream 7894 true Chr16: 32358777-32366670 Glycine max
Glyma.16G164700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32358777-32360776 Glycine max
Glyma.16G164700 2.0kb downstream 2.0kb downstream 7894 true Chr16: 32360777-32368670 Glycine max
Glyma.16G164700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32366671-32368670 Glycine max
Glyma.16G164700 5.0kb upstream 5.0kb upstream 10894 true Chr16: 32355777-32366670 Glycine max
Glyma.16G164700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32355777-32360776 Glycine max
Glyma.16G164700 5.0kb downstream 5.0kb downstream 10894 true Chr16: 32360777-32371670 Glycine max
Glyma.16G164700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32366671-32371670 Glycine max
Glyma.16G164700 10.0kb upstream 10.0kb upstream 15894 true Chr16: 32350777-32366670 Glycine max
Glyma.16G164700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32350777-32360776 Glycine max
Glyma.16G164700 10.0kb downstream 10.0kb downstream 15894 true Chr16: 32360777-32376670 Glycine max
Glyma.16G164700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32366671-32376670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302234 5265 Fabidae View MSA
124068380 5270 Rosid View MSA
123749245 5271 Pentapetalae View MSA
122793562 5272 Eudicot View MSA
122051009 5273 Angiosperm View MSA
121349876 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0063 0.0 59.1978    
cufflinks 9.02178 0.0 29.0402   Low
cufflinks 19.1569 0.0 66.2878   High
cufflinks 10.6879 0.0 40.7246    
cufflinks 15.254 0.0 53.2468    
cufflinks 17.0696 0.0 58.4148    
cufflinks 11.6668 0.0 43.096    
cufflinks 11.0852 0.0 41.9639    
cufflinks 17.5861 0.0 58.9799    
cufflinks 0.471       Low
cufflinks 1.379       High
cufflinks 0.951        
cufflinks 0.793        
cufflinks 0.945        
cufflinks 1.021        
cufflinks 0.644        
cufflinks 0.741        
cufflinks 0.807        
cufflinks 0.525       Low
cufflinks 0.664        
cufflinks 1.08        
cufflinks 0.642        
cufflinks 0.694        
cufflinks 1.387       High
cufflinks 0.605        
cufflinks 1.042        

0 Strain