Gene : Glyma.16G166500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12197:SF160 - PROTEIN SET DOMAIN GROUP 41 Genomic Order:  1665
Name:  ? Glyma.16G166500 Secondary Identifier:  ? PAC:30558975
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G166500 0.5kb upstream 0.5kb upstream 4690 true Chr16: 32581279-32585968 Glycine max
Glyma.16G166500 0.5kb upstream 0.5kb upstream 500 false Chr16: 32581279-32581778 Glycine max
Glyma.16G166500 0.5kb downstream 0.5kb downstream 4690 true Chr16: 32581779-32586468 Glycine max
Glyma.16G166500 0.5kb downstream 0.5kb downstream 500 false Chr16: 32585969-32586468 Glycine max
Glyma.16G166500 1.0kb upstream 1.0kb upstream 5190 true Chr16: 32580779-32585968 Glycine max
Glyma.16G166500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32580779-32581778 Glycine max
Glyma.16G166500 1.0kb downstream 1.0kb downstream 5190 true Chr16: 32581779-32586968 Glycine max
Glyma.16G166500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32585969-32586968 Glycine max
Glyma.16G166500 2.0kb upstream 2.0kb upstream 6190 true Chr16: 32579779-32585968 Glycine max
Glyma.16G166500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32579779-32581778 Glycine max
Glyma.16G166500 2.0kb downstream 2.0kb downstream 6190 true Chr16: 32581779-32587968 Glycine max
Glyma.16G166500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32585969-32587968 Glycine max
Glyma.16G166500 5.0kb upstream 5.0kb upstream 9190 true Chr16: 32576779-32585968 Glycine max
Glyma.16G166500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32576779-32581778 Glycine max
Glyma.16G166500 5.0kb downstream 5.0kb downstream 9190 true Chr16: 32581779-32590968 Glycine max
Glyma.16G166500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32585969-32590968 Glycine max
Glyma.16G166500 10.0kb upstream 10.0kb upstream 14190 true Chr16: 32571779-32585968 Glycine max
Glyma.16G166500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32571779-32581778 Glycine max
Glyma.16G166500 10.0kb downstream 10.0kb downstream 14190 true Chr16: 32581779-32595968 Glycine max
Glyma.16G166500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32585969-32595968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302515 5265 Fabidae View MSA
124050457 5270 Rosid View MSA
123748819 5271 Pentapetalae View MSA
122793120 5272 Eudicot View MSA
122044425 5273 Angiosperm View MSA
121310294 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52319 0.0 16.7606   High
cufflinks 3.59482 0.0 14.4654    
cufflinks 3.80017 0.0 15.1775    
cufflinks 3.77989 0.0 14.8463    
cufflinks 2.79383 0.0 11.9867    
cufflinks 2.40937 0.0 8.16136   Low
cufflinks 5.08742 0.0 18.2563   High
cufflinks 3.59184 0.0 14.3149    
cufflinks 2.52164 0.0 11.22   Low
cufflinks 0.613        
cufflinks 0.367       Low
cufflinks 0.957        
cufflinks 0.452        
cufflinks 0.479        
cufflinks 0.511        
cufflinks 1.194        
cufflinks 0.295       Low
cufflinks 1.028        
cufflinks 0.967        
cufflinks 1.641       High
cufflinks 0.42        
cufflinks 1.595       High
cufflinks 1.124        
cufflinks 0.441        
cufflinks 1.275       High
cufflinks 0.245       Low

0 Strain