Gene : Glyma.16G167600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  1676
Name:  ? Glyma.16G167600 Secondary Identifier:  ? PAC:30561139
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G167600 0.5kb upstream 0.5kb upstream 4328 true Chr16: 32731192-32735519 Glycine max
Glyma.16G167600 0.5kb upstream 0.5kb upstream 500 false Chr16: 32735020-32735519 Glycine max
Glyma.16G167600 0.5kb downstream 0.5kb downstream 4328 true Chr16: 32730692-32735019 Glycine max
Glyma.16G167600 0.5kb downstream 0.5kb downstream 500 false Chr16: 32730692-32731191 Glycine max
Glyma.16G167600 1.0kb upstream 1.0kb upstream 4828 true Chr16: 32731192-32736019 Glycine max
Glyma.16G167600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32735020-32736019 Glycine max
Glyma.16G167600 1.0kb downstream 1.0kb downstream 4828 true Chr16: 32730192-32735019 Glycine max
Glyma.16G167600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32730192-32731191 Glycine max
Glyma.16G167600 2.0kb upstream 2.0kb upstream 5828 true Chr16: 32731192-32737019 Glycine max
Glyma.16G167600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32735020-32737019 Glycine max
Glyma.16G167600 2.0kb downstream 2.0kb downstream 5828 true Chr16: 32729192-32735019 Glycine max
Glyma.16G167600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32729192-32731191 Glycine max
Glyma.16G167600 5.0kb upstream 5.0kb upstream 8828 true Chr16: 32731192-32740019 Glycine max
Glyma.16G167600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32735020-32740019 Glycine max
Glyma.16G167600 5.0kb downstream 5.0kb downstream 8828 true Chr16: 32726192-32735019 Glycine max
Glyma.16G167600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32726192-32731191 Glycine max
Glyma.16G167600 10.0kb upstream 10.0kb upstream 13828 true Chr16: 32731192-32745019 Glycine max
Glyma.16G167600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32735020-32745019 Glycine max
Glyma.16G167600 10.0kb downstream 10.0kb downstream 13828 true Chr16: 32721192-32735019 Glycine max
Glyma.16G167600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32721192-32731191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313930 5265 Fabidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0749 0.0 74.44 High High
cufflinks 13.8343 0.0 37.3024    
cufflinks 12.2005 0.0 32.7458    
cufflinks 7.62777 0.0 20.3615   Low
cufflinks 15.1358 0.0 41.0709    
cufflinks 9.81404 0.0 26.1975    
cufflinks 12.2608 0.0 32.951    
cufflinks 10.3488 0.0 27.6669    
cufflinks 8.56362 0.0 22.8475    
cufflinks 21.664     High  
cufflinks 17.016     High  
cufflinks 18.656     High  
cufflinks 20.596     High  
cufflinks 31.828     High  
cufflinks 3.148       Low
cufflinks 51.502     High High
cufflinks 3.44       Low
cufflinks 30.651     High  
cufflinks 12.934     High  
cufflinks 51.701     High High
cufflinks 22.193     High  
cufflinks 47.807     High High
cufflinks 38.667     High  
cufflinks 15.006     High  
cufflinks 40.091     High  
cufflinks 16.415     High  

0 Strain