Gene : Glyma.16G153800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11960:SF18 - 4EHP, ISOFORM B Genomic Order:  1538
Name:  ? Glyma.16G153800 Secondary Identifier:  ? PAC:30559128
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G153800 0.5kb upstream 0.5kb upstream 3766 true Chr16: 31440658-31444423 Glycine max
Glyma.16G153800 0.5kb upstream 0.5kb upstream 500 false Chr16: 31440658-31441157 Glycine max
Glyma.16G153800 0.5kb downstream 0.5kb downstream 3766 true Chr16: 31441158-31444923 Glycine max
Glyma.16G153800 0.5kb downstream 0.5kb downstream 500 false Chr16: 31444424-31444923 Glycine max
Glyma.16G153800 1.0kb upstream 1.0kb upstream 4266 true Chr16: 31440158-31444423 Glycine max
Glyma.16G153800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31440158-31441157 Glycine max
Glyma.16G153800 1.0kb downstream 1.0kb downstream 4266 true Chr16: 31441158-31445423 Glycine max
Glyma.16G153800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31444424-31445423 Glycine max
Glyma.16G153800 2.0kb upstream 2.0kb upstream 5266 true Chr16: 31439158-31444423 Glycine max
Glyma.16G153800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31439158-31441157 Glycine max
Glyma.16G153800 2.0kb downstream 2.0kb downstream 5266 true Chr16: 31441158-31446423 Glycine max
Glyma.16G153800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31444424-31446423 Glycine max
Glyma.16G153800 5.0kb upstream 5.0kb upstream 8266 true Chr16: 31436158-31444423 Glycine max
Glyma.16G153800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31436158-31441157 Glycine max
Glyma.16G153800 5.0kb downstream 5.0kb downstream 8266 true Chr16: 31441158-31449423 Glycine max
Glyma.16G153800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31444424-31449423 Glycine max
Glyma.16G153800 10.0kb upstream 10.0kb upstream 13266 true Chr16: 31431158-31444423 Glycine max
Glyma.16G153800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31431158-31441157 Glycine max
Glyma.16G153800 10.0kb downstream 10.0kb downstream 13266 true Chr16: 31441158-31454423 Glycine max
Glyma.16G153800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31444424-31454423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306467 5265 Fabidae View MSA
124061586 5270 Rosid View MSA
123751569 5271 Pentapetalae View MSA
122785682 5272 Eudicot View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.4087 0.0 123.814 High  
cufflinks 26.9335 0.0 79.8536 High  
cufflinks 23.1597 0.0 93.8517 High Low
cufflinks 27.4468 0.0 114.044 High  
cufflinks 31.3626 0.0 127.876 High  
cufflinks 25.2959 0.0 101.832 High  
cufflinks 56.6255 0.0 250.514 High High
cufflinks 31.3068 0.0 108.538 High  
cufflinks 31.2933 0.0 129.763 High  
cufflinks 2.558        
cufflinks 4.677       High
cufflinks 2.51       Low
cufflinks 2.827        
cufflinks 3.269        
cufflinks 3.989       High
cufflinks 2.984        
cufflinks 3.006        
cufflinks 2.225       Low
cufflinks 2.609        
cufflinks 3.05        
cufflinks 3.92       High
cufflinks 2.851        
cufflinks 2.612        
cufflinks 3.889       High
cufflinks 2.859        
cufflinks 3.912       High

0 Strain