Gene : Glyma.16G154600 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.4.1.214 - Glycoprotein 3-alpha-L-fucosyltransferase / GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase Genomic Order:  1546
Name:  ? Glyma.16G154600 Secondary Identifier:  ? PAC:30561403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G154600 0.5kb upstream 0.5kb upstream 4812 true Chr16: 31484987-31489798 Glycine max
Glyma.16G154600 0.5kb upstream 0.5kb upstream 500 false Chr16: 31489299-31489798 Glycine max
Glyma.16G154600 0.5kb downstream 0.5kb downstream 4812 true Chr16: 31484487-31489298 Glycine max
Glyma.16G154600 0.5kb downstream 0.5kb downstream 500 false Chr16: 31484487-31484986 Glycine max
Glyma.16G154600 1.0kb upstream 1.0kb upstream 5312 true Chr16: 31484987-31490298 Glycine max
Glyma.16G154600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31489299-31490298 Glycine max
Glyma.16G154600 1.0kb downstream 1.0kb downstream 5312 true Chr16: 31483987-31489298 Glycine max
Glyma.16G154600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31483987-31484986 Glycine max
Glyma.16G154600 2.0kb upstream 2.0kb upstream 6312 true Chr16: 31484987-31491298 Glycine max
Glyma.16G154600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31489299-31491298 Glycine max
Glyma.16G154600 2.0kb downstream 2.0kb downstream 6312 true Chr16: 31482987-31489298 Glycine max
Glyma.16G154600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31482987-31484986 Glycine max
Glyma.16G154600 5.0kb upstream 5.0kb upstream 9312 true Chr16: 31484987-31494298 Glycine max
Glyma.16G154600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31489299-31494298 Glycine max
Glyma.16G154600 5.0kb downstream 5.0kb downstream 9312 true Chr16: 31479987-31489298 Glycine max
Glyma.16G154600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31479987-31484986 Glycine max
Glyma.16G154600 10.0kb upstream 10.0kb upstream 14312 true Chr16: 31484987-31499298 Glycine max
Glyma.16G154600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31489299-31499298 Glycine max
Glyma.16G154600 10.0kb downstream 10.0kb downstream 14312 true Chr16: 31474987-31489298 Glycine max
Glyma.16G154600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31474987-31484986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615520 5273 Angiosperm View MSA
122250559 5265 Fabidae View MSA
123993708 5270 Rosid View MSA
123568448 5271 Pentapetalae View MSA
122603193 5272 Eudicot View MSA
120887710 5274 Embryophyte View MSA
122928464 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176216 0.0 0.692526 Low  
cufflinks 0.135188 0.0 0.536098 Low  
cufflinks 6.76345 0.0 19.6297   High
cufflinks 0.291635 0.0 1.12208    
cufflinks 0.302387 0.0 1.16316    
cufflinks 0.130472 0.0 0.51817 Low  
cufflinks 4.64829 0.0 14.2756   High
cufflinks 0.221766 0.0 0.863183 Low  
cufflinks 0.0518576 0.0 0.214661 Low Low
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.91       High
cufflinks 0.029     Low  
cufflinks 0.025     Low  
cufflinks 0.004     Low Low
cufflinks 0.036     Low  
cufflinks 0.029     Low  
cufflinks 0.031     Low  
cufflinks 0.121       High
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.029     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  

0 Strain