Gene : Glyma.16G156700 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  1567
Name:  ? Glyma.16G156700 Secondary Identifier:  ? PAC:30560903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G156700 0.5kb upstream 0.5kb upstream 2577 true Chr16: 31681401-31683977 Glycine max
Glyma.16G156700 0.5kb upstream 0.5kb upstream 500 false Chr16: 31683478-31683977 Glycine max
Glyma.16G156700 0.5kb downstream 0.5kb downstream 2577 true Chr16: 31680901-31683477 Glycine max
Glyma.16G156700 0.5kb downstream 0.5kb downstream 500 false Chr16: 31680901-31681400 Glycine max
Glyma.16G156700 1.0kb upstream 1.0kb upstream 3077 true Chr16: 31681401-31684477 Glycine max
Glyma.16G156700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31683478-31684477 Glycine max
Glyma.16G156700 1.0kb downstream 1.0kb downstream 3077 true Chr16: 31680401-31683477 Glycine max
Glyma.16G156700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31680401-31681400 Glycine max
Glyma.16G156700 2.0kb upstream 2.0kb upstream 4077 true Chr16: 31681401-31685477 Glycine max
Glyma.16G156700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31683478-31685477 Glycine max
Glyma.16G156700 2.0kb downstream 2.0kb downstream 4077 true Chr16: 31679401-31683477 Glycine max
Glyma.16G156700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31679401-31681400 Glycine max
Glyma.16G156700 5.0kb upstream 5.0kb upstream 7077 true Chr16: 31681401-31688477 Glycine max
Glyma.16G156700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31683478-31688477 Glycine max
Glyma.16G156700 5.0kb downstream 5.0kb downstream 7077 true Chr16: 31676401-31683477 Glycine max
Glyma.16G156700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31676401-31681400 Glycine max
Glyma.16G156700 10.0kb upstream 10.0kb upstream 12077 true Chr16: 31681401-31693477 Glycine max
Glyma.16G156700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31683478-31693477 Glycine max
Glyma.16G156700 10.0kb downstream 10.0kb downstream 12077 true Chr16: 31671401-31683477 Glycine max
Glyma.16G156700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31671401-31681400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253746 5265 Fabidae View MSA
123996216 5270 Rosid View MSA
123570732 5271 Pentapetalae View MSA
122605467 5272 Eudicot View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061955 0.0 0.248026 Low Low
cufflinks 1.23413 0.0 4.20851    
cufflinks 0.700421 0.0 2.49966    
cufflinks 0.291627 0.0 1.09525    
cufflinks 0.891409 0.0 3.14216    
cufflinks 6.39619 0.0 17.7236   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.110833 0.0 0.433834 Low Low
cufflinks 0.596261 0.0 2.15828    
cufflinks 0.007     Low Low
cufflinks 0.429        
cufflinks 0.324        
cufflinks 2.485       High
cufflinks 0.36        
cufflinks 0.047     Low Low
cufflinks 0.163        
cufflinks 4.035       High
cufflinks 0.34        
cufflinks 1.289       High
cufflinks 0.033     Low Low
cufflinks 0.271        
cufflinks 0.087     Low  
cufflinks 0.146        
cufflinks 0.493        
cufflinks 0.101        
cufflinks 0.536        

0 Strain