Gene : Glyma.16G159900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22932:SF1 - CO-CHAPERONE PROTEIN SBA1 Genomic Order:  1599
Name:  ? Glyma.16G159900 Secondary Identifier:  ? PAC:30558876
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G159900 0.5kb upstream 0.5kb upstream 3683 true Chr16: 31948729-31952411 Glycine max
Glyma.16G159900 0.5kb upstream 0.5kb upstream 500 false Chr16: 31948729-31949228 Glycine max
Glyma.16G159900 0.5kb downstream 0.5kb downstream 3683 true Chr16: 31949229-31952911 Glycine max
Glyma.16G159900 0.5kb downstream 0.5kb downstream 500 false Chr16: 31952412-31952911 Glycine max
Glyma.16G159900 1.0kb upstream 1.0kb upstream 4183 true Chr16: 31948229-31952411 Glycine max
Glyma.16G159900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31948229-31949228 Glycine max
Glyma.16G159900 1.0kb downstream 1.0kb downstream 4183 true Chr16: 31949229-31953411 Glycine max
Glyma.16G159900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31952412-31953411 Glycine max
Glyma.16G159900 2.0kb upstream 2.0kb upstream 5183 true Chr16: 31947229-31952411 Glycine max
Glyma.16G159900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31947229-31949228 Glycine max
Glyma.16G159900 2.0kb downstream 2.0kb downstream 5183 true Chr16: 31949229-31954411 Glycine max
Glyma.16G159900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31952412-31954411 Glycine max
Glyma.16G159900 5.0kb upstream 5.0kb upstream 8183 true Chr16: 31944229-31952411 Glycine max
Glyma.16G159900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31944229-31949228 Glycine max
Glyma.16G159900 5.0kb downstream 5.0kb downstream 8183 true Chr16: 31949229-31957411 Glycine max
Glyma.16G159900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31952412-31957411 Glycine max
Glyma.16G159900 10.0kb upstream 10.0kb upstream 13183 true Chr16: 31939229-31952411 Glycine max
Glyma.16G159900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31939229-31949228 Glycine max
Glyma.16G159900 10.0kb downstream 10.0kb downstream 13183 true Chr16: 31949229-31962411 Glycine max
Glyma.16G159900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31952412-31962411 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311546 5265 Fabidae View MSA
124069234 5270 Rosid View MSA
123751526 5271 Pentapetalae View MSA
122794071 5272 Eudicot View MSA
122047385 5273 Angiosperm View MSA
121348717 5274 Embryophyte View MSA
123424111 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.104 0.0 54.0502    
cufflinks 16.7201 0.0 60.2053    
cufflinks 10.6993 0.0 41.2674   Low
cufflinks 14.8214 0.0 52.2814    
cufflinks 22.3608 0.0 77.0786 High  
cufflinks 14.0548 0.0 50.8285    
cufflinks 26.5434 0.0 91.4431 High  
cufflinks 22.6087 0.0 80.2561 High  
cufflinks 44.6288 0.0 160.51 High High
cufflinks 2.853        
cufflinks 1.17       Low
cufflinks 2.709        
cufflinks 3.859        
cufflinks 5.149       High
cufflinks 12.463     High High
cufflinks 2.073        
cufflinks 2.633        
cufflinks 2.952        
cufflinks 3.465        
cufflinks 1.871        
cufflinks 2.425        
cufflinks 2.099        
cufflinks 2.835        
cufflinks 1.124       Low
cufflinks 2.302        
cufflinks 1.921        

0 Strain