Gene : Glyma.16G145300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11802:SF71 - SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED Genomic Order:  1453
Name:  ? Glyma.16G145300 Secondary Identifier:  ? PAC:30559785
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G145300 0.5kb upstream 0.5kb upstream 4571 true Chr16: 30604086-30608656 Glycine max
Glyma.16G145300 0.5kb upstream 0.5kb upstream 500 false Chr16: 30604086-30604585 Glycine max
Glyma.16G145300 0.5kb downstream 0.5kb downstream 4571 true Chr16: 30604586-30609156 Glycine max
Glyma.16G145300 0.5kb downstream 0.5kb downstream 500 false Chr16: 30608657-30609156 Glycine max
Glyma.16G145300 1.0kb upstream 1.0kb upstream 5071 true Chr16: 30603586-30608656 Glycine max
Glyma.16G145300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30603586-30604585 Glycine max
Glyma.16G145300 1.0kb downstream 1.0kb downstream 5071 true Chr16: 30604586-30609656 Glycine max
Glyma.16G145300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30608657-30609656 Glycine max
Glyma.16G145300 2.0kb upstream 2.0kb upstream 6071 true Chr16: 30602586-30608656 Glycine max
Glyma.16G145300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30602586-30604585 Glycine max
Glyma.16G145300 2.0kb downstream 2.0kb downstream 6071 true Chr16: 30604586-30610656 Glycine max
Glyma.16G145300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30608657-30610656 Glycine max
Glyma.16G145300 5.0kb upstream 5.0kb upstream 9071 true Chr16: 30599586-30608656 Glycine max
Glyma.16G145300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30599586-30604585 Glycine max
Glyma.16G145300 5.0kb downstream 5.0kb downstream 9071 true Chr16: 30604586-30613656 Glycine max
Glyma.16G145300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30608657-30613656 Glycine max
Glyma.16G145300 10.0kb upstream 10.0kb upstream 14071 true Chr16: 30594586-30608656 Glycine max
Glyma.16G145300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30594586-30604585 Glycine max
Glyma.16G145300 10.0kb downstream 10.0kb downstream 14071 true Chr16: 30604586-30618656 Glycine max
Glyma.16G145300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30608657-30618656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247275 5265 Fabidae Singleton cluster - no MSA
123991073 5270 Rosid Singleton cluster - no MSA
123566054 5271 Pentapetalae Singleton cluster - no MSA
122798273 5272 Eudicot View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2007 0.0 60.1548    
cufflinks 36.6986 0.0 134.467 High  
cufflinks 8.30683 0.0 30.9274    
cufflinks 20.9662 0.0 72.7924 High  
cufflinks 88.4445 0.0 352.592 High High
cufflinks 26.4556 0.0 93.6008 High  
cufflinks 0.69311 0.0 3.12874   Low
cufflinks 5.87135 0.0 24.1584    
cufflinks 9.70179 0.0 35.6162    
cufflinks 5.224        
cufflinks 0.361       Low
cufflinks 8.286     High  
cufflinks 9.416     High  
cufflinks 14.23     High High
cufflinks 0.023     Low Low
cufflinks 3.929        
cufflinks 0.932        
cufflinks 6.005        
cufflinks 9.524     High  
cufflinks 3.002        
cufflinks 0.73        
cufflinks 2.825        
cufflinks 6.535        
cufflinks 0.196       Low
cufflinks 4.027        
cufflinks 1.072        

0 Strain