Gene : Glyma.16G145700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13377//PTHR13377:SF4 - PLACENTAL PROTEIN 6 Genomic Order:  1457
Name:  ? Glyma.16G145700 Secondary Identifier:  ? PAC:30560545
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G145700 0.5kb upstream 0.5kb upstream 6682 true Chr16: 30667351-30674032 Glycine max
Glyma.16G145700 0.5kb upstream 0.5kb upstream 500 false Chr16: 30673533-30674032 Glycine max
Glyma.16G145700 0.5kb downstream 0.5kb downstream 6682 true Chr16: 30666851-30673532 Glycine max
Glyma.16G145700 0.5kb downstream 0.5kb downstream 500 false Chr16: 30666851-30667350 Glycine max
Glyma.16G145700 1.0kb upstream 1.0kb upstream 7182 true Chr16: 30667351-30674532 Glycine max
Glyma.16G145700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30673533-30674532 Glycine max
Glyma.16G145700 1.0kb downstream 1.0kb downstream 7182 true Chr16: 30666351-30673532 Glycine max
Glyma.16G145700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30666351-30667350 Glycine max
Glyma.16G145700 2.0kb upstream 2.0kb upstream 8182 true Chr16: 30667351-30675532 Glycine max
Glyma.16G145700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30673533-30675532 Glycine max
Glyma.16G145700 2.0kb downstream 2.0kb downstream 8182 true Chr16: 30665351-30673532 Glycine max
Glyma.16G145700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30665351-30667350 Glycine max
Glyma.16G145700 5.0kb upstream 5.0kb upstream 11182 true Chr16: 30667351-30678532 Glycine max
Glyma.16G145700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30673533-30678532 Glycine max
Glyma.16G145700 5.0kb downstream 5.0kb downstream 11182 true Chr16: 30662351-30673532 Glycine max
Glyma.16G145700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30662351-30667350 Glycine max
Glyma.16G145700 10.0kb upstream 10.0kb upstream 16182 true Chr16: 30667351-30683532 Glycine max
Glyma.16G145700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30673533-30683532 Glycine max
Glyma.16G145700 10.0kb downstream 10.0kb downstream 16182 true Chr16: 30657351-30673532 Glycine max
Glyma.16G145700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30657351-30667350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311918 5265 Fabidae View MSA
124061195 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4328 0.0 31.6062   Low
cufflinks 18.5216 0.0 49.7342    
cufflinks 16.0632 0.0 43.3188    
cufflinks 23.2817 0.0 62.1537 High  
cufflinks 21.732 0.0 58.0896 High  
cufflinks 19.4429 0.0 52.1027    
cufflinks 20.5578 0.0 55.0364    
cufflinks 23.144 0.0 61.794 High  
cufflinks 22.4594 0.0 59.9861 High  
cufflinks 5.336       High
cufflinks 1.601       Low
cufflinks 3.937        
cufflinks 5.133        
cufflinks 5.704       High
cufflinks 2.049       Low
cufflinks 3.635        
cufflinks 2.699        
cufflinks 6.179       High
cufflinks 5.032        
cufflinks 3.952        
cufflinks 2.641        
cufflinks 4.029        
cufflinks 3.593        
cufflinks 2.303       Low
cufflinks 3.654        
cufflinks 2.517        

0 Strain