Gene : Glyma.16G145900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22883:SF80 - PROTEIN S-ACYLTRANSFERASE 5-RELATED Genomic Order:  1459
Name:  ? Glyma.16G145900 Secondary Identifier:  ? PAC:30559775
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G145900 0.5kb upstream 0.5kb upstream 8634 true Chr16: 30681265-30689898 Glycine max
Glyma.16G145900 0.5kb upstream 0.5kb upstream 500 false Chr16: 30689399-30689898 Glycine max
Glyma.16G145900 0.5kb downstream 0.5kb downstream 8634 true Chr16: 30680765-30689398 Glycine max
Glyma.16G145900 0.5kb downstream 0.5kb downstream 500 false Chr16: 30680765-30681264 Glycine max
Glyma.16G145900 1.0kb upstream 1.0kb upstream 9134 true Chr16: 30681265-30690398 Glycine max
Glyma.16G145900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30689399-30690398 Glycine max
Glyma.16G145900 1.0kb downstream 1.0kb downstream 9134 true Chr16: 30680265-30689398 Glycine max
Glyma.16G145900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30680265-30681264 Glycine max
Glyma.16G145900 2.0kb upstream 2.0kb upstream 10134 true Chr16: 30681265-30691398 Glycine max
Glyma.16G145900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30689399-30691398 Glycine max
Glyma.16G145900 2.0kb downstream 2.0kb downstream 10134 true Chr16: 30679265-30689398 Glycine max
Glyma.16G145900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30679265-30681264 Glycine max
Glyma.16G145900 5.0kb upstream 5.0kb upstream 13134 true Chr16: 30681265-30694398 Glycine max
Glyma.16G145900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30689399-30694398 Glycine max
Glyma.16G145900 5.0kb downstream 5.0kb downstream 13134 true Chr16: 30676265-30689398 Glycine max
Glyma.16G145900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30676265-30681264 Glycine max
Glyma.16G145900 10.0kb upstream 10.0kb upstream 18134 true Chr16: 30681265-30699398 Glycine max
Glyma.16G145900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30689399-30699398 Glycine max
Glyma.16G145900 10.0kb downstream 10.0kb downstream 18134 true Chr16: 30671265-30689398 Glycine max
Glyma.16G145900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30671265-30681264 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303264 5265 Fabidae View MSA
124064327 5270 Rosid View MSA
123741712 5271 Pentapetalae View MSA
122787049 5272 Eudicot View MSA
122047692 5273 Angiosperm View MSA
123428988 5275 Viridiplantae View MSA
121350909 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.872056 0.0 4.93915   Low
cufflinks 12.3126 0.0 46.4291    
cufflinks 2.38055 0.0 10.3201   Low
cufflinks 11.7497 0.0 46.0052    
cufflinks 14.1092 0.0 52.4182    
cufflinks 7.07742 0.0 26.0961    
cufflinks 31.7204 0.0 121.191 High High
cufflinks 15.4077 0.0 58.0522    
cufflinks 11.4416 0.0 43.3594    
cufflinks 1.505       High
cufflinks 0.301        
cufflinks 0.414        
cufflinks 1.032       High
cufflinks 1.127       High
cufflinks 0.319        
cufflinks 0.3        
cufflinks 0.503        
cufflinks 0.702        
cufflinks 1.093       High
cufflinks 0.218       Low
cufflinks 0.539        
cufflinks 0.241       Low
cufflinks 0.414        
cufflinks 0.251        
cufflinks 0.224       Low
cufflinks 0.371        

0 Strain