Gene : Glyma.16G148700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31677:SF5 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP Genomic Order:  1487
Name:  ? Glyma.16G148700 Secondary Identifier:  ? PAC:30558880
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G148700 0.5kb upstream 0.5kb upstream 1824 true Chr16: 30957667-30959490 Glycine max
Glyma.16G148700 0.5kb upstream 0.5kb upstream 500 false Chr16: 30957667-30958166 Glycine max
Glyma.16G148700 0.5kb downstream 0.5kb downstream 1824 true Chr16: 30958167-30959990 Glycine max
Glyma.16G148700 0.5kb downstream 0.5kb downstream 500 false Chr16: 30959491-30959990 Glycine max
Glyma.16G148700 1.0kb upstream 1.0kb upstream 2324 true Chr16: 30957167-30959490 Glycine max
Glyma.16G148700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30957167-30958166 Glycine max
Glyma.16G148700 1.0kb downstream 1.0kb downstream 2324 true Chr16: 30958167-30960490 Glycine max
Glyma.16G148700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30959491-30960490 Glycine max
Glyma.16G148700 2.0kb upstream 2.0kb upstream 3324 true Chr16: 30956167-30959490 Glycine max
Glyma.16G148700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30956167-30958166 Glycine max
Glyma.16G148700 2.0kb downstream 2.0kb downstream 3324 true Chr16: 30958167-30961490 Glycine max
Glyma.16G148700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30959491-30961490 Glycine max
Glyma.16G148700 5.0kb upstream 5.0kb upstream 6324 true Chr16: 30953167-30959490 Glycine max
Glyma.16G148700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30953167-30958166 Glycine max
Glyma.16G148700 5.0kb downstream 5.0kb downstream 6324 true Chr16: 30958167-30964490 Glycine max
Glyma.16G148700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30959491-30964490 Glycine max
Glyma.16G148700 10.0kb upstream 10.0kb upstream 11324 true Chr16: 30948167-30959490 Glycine max
Glyma.16G148700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30948167-30958166 Glycine max
Glyma.16G148700 10.0kb downstream 10.0kb downstream 11324 true Chr16: 30958167-30969490 Glycine max
Glyma.16G148700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30959491-30969490 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307143 5265 Fabidae View MSA
124065469 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0568727 0.0 0.234213 Low Low
cufflinks 0.948399 0.0 3.44217    
cufflinks 0.287733 0.0 1.10738 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.94539 0.0 6.67791    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.396       High
cufflinks 0.841       High
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.172        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.317        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        

0 Strain