Gene : Glyma.16G150700 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11362:SF9 - PROTEIN FLOWERING LOCUS T-RELATED Genomic Order:  1507
Name:  ? Glyma.16G150700 Secondary Identifier:  ? PAC:30559968
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G150700 0.5kb upstream 0.5kb upstream 5465 true Chr16: 31109499-31114963 Glycine max
Glyma.16G150700 0.5kb upstream 0.5kb upstream 500 false Chr16: 31109499-31109998 Glycine max
Glyma.16G150700 0.5kb downstream 0.5kb downstream 5465 true Chr16: 31109999-31115463 Glycine max
Glyma.16G150700 0.5kb downstream 0.5kb downstream 500 false Chr16: 31114964-31115463 Glycine max
Glyma.16G150700 1.0kb upstream 1.0kb upstream 5965 true Chr16: 31108999-31114963 Glycine max
Glyma.16G150700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31108999-31109998 Glycine max
Glyma.16G150700 1.0kb downstream 1.0kb downstream 5965 true Chr16: 31109999-31115963 Glycine max
Glyma.16G150700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31114964-31115963 Glycine max
Glyma.16G150700 2.0kb upstream 2.0kb upstream 6965 true Chr16: 31107999-31114963 Glycine max
Glyma.16G150700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31107999-31109998 Glycine max
Glyma.16G150700 2.0kb downstream 2.0kb downstream 6965 true Chr16: 31109999-31116963 Glycine max
Glyma.16G150700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31114964-31116963 Glycine max
Glyma.16G150700 5.0kb upstream 5.0kb upstream 9965 true Chr16: 31104999-31114963 Glycine max
Glyma.16G150700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31104999-31109998 Glycine max
Glyma.16G150700 5.0kb downstream 5.0kb downstream 9965 true Chr16: 31109999-31119963 Glycine max
Glyma.16G150700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31114964-31119963 Glycine max
Glyma.16G150700 10.0kb upstream 10.0kb upstream 14965 true Chr16: 31099999-31114963 Glycine max
Glyma.16G150700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31099999-31109998 Glycine max
Glyma.16G150700 10.0kb downstream 10.0kb downstream 14965 true Chr16: 31109999-31124963 Glycine max
Glyma.16G150700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31114964-31124963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304508 5265 Fabidae View MSA
124050326 5270 Rosid View MSA
123746977 5271 Pentapetalae View MSA
122795866 5272 Eudicot View MSA
122044368 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121310284 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.314664 0.0 1.23663    
cufflinks 0.0306149 0.0 0.138839 Low  
cufflinks 5.31704 0.0 17.2896   High
cufflinks 5.80669 0.0 18.7096   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.054878 0.0 0.236354 Low  
cufflinks 0.0618266 0.0 0.263641 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.074       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain