Gene : Glyma.16G151700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11097:SF8 - EXOSOME COMPLEX COMPONENT RRP42 Genomic Order:  1517
Name:  ? Glyma.16G151700 Secondary Identifier:  ? PAC:30561443
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G151700 0.5kb upstream 0.5kb upstream 5595 true Chr16: 31214033-31219627 Glycine max
Glyma.16G151700 0.5kb upstream 0.5kb upstream 500 false Chr16: 31214033-31214532 Glycine max
Glyma.16G151700 0.5kb downstream 0.5kb downstream 5595 true Chr16: 31214533-31220127 Glycine max
Glyma.16G151700 0.5kb downstream 0.5kb downstream 500 false Chr16: 31219628-31220127 Glycine max
Glyma.16G151700 1.0kb upstream 1.0kb upstream 6095 true Chr16: 31213533-31219627 Glycine max
Glyma.16G151700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31213533-31214532 Glycine max
Glyma.16G151700 1.0kb downstream 1.0kb downstream 6095 true Chr16: 31214533-31220627 Glycine max
Glyma.16G151700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31219628-31220627 Glycine max
Glyma.16G151700 2.0kb upstream 2.0kb upstream 7095 true Chr16: 31212533-31219627 Glycine max
Glyma.16G151700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31212533-31214532 Glycine max
Glyma.16G151700 2.0kb downstream 2.0kb downstream 7095 true Chr16: 31214533-31221627 Glycine max
Glyma.16G151700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31219628-31221627 Glycine max
Glyma.16G151700 5.0kb upstream 5.0kb upstream 10095 true Chr16: 31209533-31219627 Glycine max
Glyma.16G151700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31209533-31214532 Glycine max
Glyma.16G151700 5.0kb downstream 5.0kb downstream 10095 true Chr16: 31214533-31224627 Glycine max
Glyma.16G151700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31219628-31224627 Glycine max
Glyma.16G151700 10.0kb upstream 10.0kb upstream 15095 true Chr16: 31204533-31219627 Glycine max
Glyma.16G151700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31204533-31214532 Glycine max
Glyma.16G151700 10.0kb downstream 10.0kb downstream 15095 true Chr16: 31214533-31229627 Glycine max
Glyma.16G151700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31219628-31229627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304830 5265 Fabidae View MSA
124064835 5270 Rosid View MSA
123739797 5271 Pentapetalae View MSA
122793133 5272 Eudicot View MSA
122044791 5273 Angiosperm View MSA
121345379 5274 Embryophyte View MSA
123428075 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6758 0.0 43.4203    
cufflinks 10.1747 0.0 39.808    
cufflinks 7.74483 0.0 31.2421    
cufflinks 6.71572 0.0 22.8767   Low
cufflinks 15.4772 0.0 60.2144   High
cufflinks 9.21607 0.0 36.5831    
cufflinks 8.62807 0.0 33.8258    
cufflinks 7.28031 0.0 31.4851   Low
cufflinks 11.7997 0.0 45.7055    
cufflinks 1.025        
cufflinks 0.653       Low
cufflinks 1.923        
cufflinks 3.107       High
cufflinks 4.642       High
cufflinks 0.944        
cufflinks 1.719        
cufflinks 1.273        
cufflinks 2.023        
cufflinks 2.05        
cufflinks 1.825        
cufflinks 0.904       Low
cufflinks 1.665        
cufflinks 1.698        
cufflinks 0.838       Low
cufflinks 1.892        
cufflinks 1.258        

0 Strain