Gene : Glyma.16G153300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11943 - GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE Genomic Order:  1533
Name:  ? Glyma.16G153300 Secondary Identifier:  ? PAC:30558807
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G153300 0.5kb upstream 0.5kb upstream 4704 true Chr16: 31387861-31392564 Glycine max
Glyma.16G153300 0.5kb upstream 0.5kb upstream 500 false Chr16: 31392065-31392564 Glycine max
Glyma.16G153300 0.5kb downstream 0.5kb downstream 4704 true Chr16: 31387361-31392064 Glycine max
Glyma.16G153300 0.5kb downstream 0.5kb downstream 500 false Chr16: 31387361-31387860 Glycine max
Glyma.16G153300 1.0kb upstream 1.0kb upstream 5204 true Chr16: 31387861-31393064 Glycine max
Glyma.16G153300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31392065-31393064 Glycine max
Glyma.16G153300 1.0kb downstream 1.0kb downstream 5204 true Chr16: 31386861-31392064 Glycine max
Glyma.16G153300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31386861-31387860 Glycine max
Glyma.16G153300 2.0kb upstream 2.0kb upstream 6204 true Chr16: 31387861-31394064 Glycine max
Glyma.16G153300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31392065-31394064 Glycine max
Glyma.16G153300 2.0kb downstream 2.0kb downstream 6204 true Chr16: 31385861-31392064 Glycine max
Glyma.16G153300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31385861-31387860 Glycine max
Glyma.16G153300 5.0kb upstream 5.0kb upstream 9204 true Chr16: 31387861-31397064 Glycine max
Glyma.16G153300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31392065-31397064 Glycine max
Glyma.16G153300 5.0kb downstream 5.0kb downstream 9204 true Chr16: 31382861-31392064 Glycine max
Glyma.16G153300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31382861-31387860 Glycine max
Glyma.16G153300 10.0kb upstream 10.0kb upstream 14204 true Chr16: 31387861-31402064 Glycine max
Glyma.16G153300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31392065-31402064 Glycine max
Glyma.16G153300 10.0kb downstream 10.0kb downstream 14204 true Chr16: 31377861-31392064 Glycine max
Glyma.16G153300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31377861-31387860 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309076 5265 Fabidae View MSA
124069087 5270 Rosid View MSA
123737596 5271 Pentapetalae View MSA
122790706 5272 Eudicot View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41798 0.0 15.7414    
cufflinks 3.79226 0.0 11.5764   Low
cufflinks 4.51897 0.0 13.4816   Low
cufflinks 7.15522 0.0 20.1261   High
cufflinks 6.34069 0.0 18.0263    
cufflinks 5.65796 0.0 16.3107    
cufflinks 5.98705 0.0 17.1957    
cufflinks 5.53483 0.0 16.047    
cufflinks 6.10722 0.0 17.4722    
cufflinks 2.331        
cufflinks 0.973       Low
cufflinks 2.261        
cufflinks 3.173       High
cufflinks 3.337       High
cufflinks 1.031       Low
cufflinks 1.426        
cufflinks 1.401        
cufflinks 2.443       High
cufflinks 2.179        
cufflinks 1.4        
cufflinks 1.197        
cufflinks 1.646        
cufflinks 1.519        
cufflinks 1.281        
cufflinks 1.243        
cufflinks 1.201        

0 Strain