Gene : Glyma.16G200100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR14237:SF28 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  2001
Name:  ? Glyma.16G200100 Secondary Identifier:  ? PAC:30561580
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5963 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G200100 0.5kb upstream 0.5kb upstream 2908 true Chr16: 36120097-36123004 Glycine max
Glyma.16G200100 0.5kb upstream 0.5kb upstream 500 false Chr16: 36120097-36120596 Glycine max
Glyma.16G200100 0.5kb downstream 0.5kb downstream 2908 true Chr16: 36120597-36123504 Glycine max
Glyma.16G200100 0.5kb downstream 0.5kb downstream 500 false Chr16: 36123005-36123504 Glycine max
Glyma.16G200100 1.0kb upstream 1.0kb upstream 3408 true Chr16: 36119597-36123004 Glycine max
Glyma.16G200100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36119597-36120596 Glycine max
Glyma.16G200100 1.0kb downstream 1.0kb downstream 3408 true Chr16: 36120597-36124004 Glycine max
Glyma.16G200100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36123005-36124004 Glycine max
Glyma.16G200100 2.0kb upstream 2.0kb upstream 4408 true Chr16: 36118597-36123004 Glycine max
Glyma.16G200100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36118597-36120596 Glycine max
Glyma.16G200100 2.0kb downstream 2.0kb downstream 4408 true Chr16: 36120597-36125004 Glycine max
Glyma.16G200100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36123005-36125004 Glycine max
Glyma.16G200100 5.0kb upstream 5.0kb upstream 7408 true Chr16: 36115597-36123004 Glycine max
Glyma.16G200100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36115597-36120596 Glycine max
Glyma.16G200100 5.0kb downstream 5.0kb downstream 7408 true Chr16: 36120597-36128004 Glycine max
Glyma.16G200100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36123005-36128004 Glycine max
Glyma.16G200100 10.0kb upstream 10.0kb upstream 12408 true Chr16: 36110597-36123004 Glycine max
Glyma.16G200100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36110597-36120596 Glycine max
Glyma.16G200100 10.0kb downstream 10.0kb downstream 12408 true Chr16: 36120597-36133004 Glycine max
Glyma.16G200100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36123005-36133004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314685 5265 Fabidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.66914 0.0 2.3763    
cufflinks 0.0167511 0.0 0.0715493 Low  
cufflinks 0.00534035 0.0 0.0252665 Low Low
cufflinks 0.0645817 0.0 0.256282 Low  
cufflinks 0.759614 0.0 2.67316    
cufflinks 15.4628 0.0 41.3304   High
cufflinks 0.00766643 0.0 0.0351138 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.04135 0.0 8.97031    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.436        
cufflinks 0.032     Low Low
cufflinks 1.054        
cufflinks 0.119        
cufflinks 0.667        
cufflinks 0.402        
cufflinks 0.097        
cufflinks 0.039     Low Low
cufflinks 0.024     Low Low
cufflinks 0.98        
cufflinks 1.083        
cufflinks 1.075        
cufflinks 0.768        
cufflinks 2.318       High
cufflinks 1.086        
cufflinks 0.613        

0 Strain