Gene : Glyma.16G200600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10584//PTHR10584:SF200 - SUGAR KINASE Genomic Order:  2006
Name:  ? Glyma.16G200600 Secondary Identifier:  ? PAC:30560282
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3801 Glycine max pathologic  
Gmax PWY-4101 Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G200600 0.5kb upstream 0.5kb upstream 4820 true Chr16: 36173339-36178158 Glycine max
Glyma.16G200600 0.5kb upstream 0.5kb upstream 500 false Chr16: 36177659-36178158 Glycine max
Glyma.16G200600 0.5kb downstream 0.5kb downstream 4820 true Chr16: 36172839-36177658 Glycine max
Glyma.16G200600 0.5kb downstream 0.5kb downstream 500 false Chr16: 36172839-36173338 Glycine max
Glyma.16G200600 1.0kb upstream 1.0kb upstream 5320 true Chr16: 36173339-36178658 Glycine max
Glyma.16G200600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36177659-36178658 Glycine max
Glyma.16G200600 1.0kb downstream 1.0kb downstream 5320 true Chr16: 36172339-36177658 Glycine max
Glyma.16G200600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36172339-36173338 Glycine max
Glyma.16G200600 2.0kb upstream 2.0kb upstream 6320 true Chr16: 36173339-36179658 Glycine max
Glyma.16G200600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36177659-36179658 Glycine max
Glyma.16G200600 2.0kb downstream 2.0kb downstream 6320 true Chr16: 36171339-36177658 Glycine max
Glyma.16G200600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36171339-36173338 Glycine max
Glyma.16G200600 5.0kb upstream 5.0kb upstream 9320 true Chr16: 36173339-36182658 Glycine max
Glyma.16G200600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36177659-36182658 Glycine max
Glyma.16G200600 5.0kb downstream 5.0kb downstream 9320 true Chr16: 36168339-36177658 Glycine max
Glyma.16G200600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36168339-36173338 Glycine max
Glyma.16G200600 10.0kb upstream 10.0kb upstream 14320 true Chr16: 36173339-36187658 Glycine max
Glyma.16G200600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36177659-36187658 Glycine max
Glyma.16G200600 10.0kb downstream 10.0kb downstream 14320 true Chr16: 36163339-36177658 Glycine max
Glyma.16G200600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36163339-36173338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95412 0.0 22.0058    
cufflinks 6.29746 0.0 27.5116    
cufflinks 3.15567 0.0 14.3674   Low
cufflinks 7.0862 0.0 30.9986    
cufflinks 10.6843 0.0 40.4533    
cufflinks 2.07822 0.0 7.96953   Low
cufflinks 6.61579 0.0 28.6592    
cufflinks 9.89929 0.0 37.5726    
cufflinks 25.4808 0.0 89.0442 High High
cufflinks 3.626        
cufflinks 40.547     High High
cufflinks 1.082        
cufflinks 0.703        
cufflinks 2.224        
cufflinks 114.02     High High
cufflinks 0.778        
cufflinks 26.47     High  
cufflinks 1.686        
cufflinks 1.461        
cufflinks 0.578       Low
cufflinks 64.695     High High
cufflinks 0.769        
cufflinks 1.286        
cufflinks 16.216     High  
cufflinks 0.621       Low
cufflinks 47.827     High High

0 Strain