Gene : Glyma.16G201400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR13935:SF54 - TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  2014
Name:  ? Glyma.16G201400 Secondary Identifier:  ? PAC:30561159
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G201400 0.5kb upstream 0.5kb upstream 2411 true Chr16: 36302167-36304577 Glycine max
Glyma.16G201400 0.5kb upstream 0.5kb upstream 500 false Chr16: 36302167-36302666 Glycine max
Glyma.16G201400 0.5kb downstream 0.5kb downstream 2411 true Chr16: 36302667-36305077 Glycine max
Glyma.16G201400 0.5kb downstream 0.5kb downstream 500 false Chr16: 36304578-36305077 Glycine max
Glyma.16G201400 1.0kb upstream 1.0kb upstream 2911 true Chr16: 36301667-36304577 Glycine max
Glyma.16G201400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36301667-36302666 Glycine max
Glyma.16G201400 1.0kb downstream 1.0kb downstream 2911 true Chr16: 36302667-36305577 Glycine max
Glyma.16G201400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36304578-36305577 Glycine max
Glyma.16G201400 2.0kb upstream 2.0kb upstream 3911 true Chr16: 36300667-36304577 Glycine max
Glyma.16G201400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36300667-36302666 Glycine max
Glyma.16G201400 2.0kb downstream 2.0kb downstream 3911 true Chr16: 36302667-36306577 Glycine max
Glyma.16G201400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36304578-36306577 Glycine max
Glyma.16G201400 5.0kb upstream 5.0kb upstream 6911 true Chr16: 36297667-36304577 Glycine max
Glyma.16G201400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36297667-36302666 Glycine max
Glyma.16G201400 5.0kb downstream 5.0kb downstream 6911 true Chr16: 36302667-36309577 Glycine max
Glyma.16G201400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36304578-36309577 Glycine max
Glyma.16G201400 10.0kb upstream 10.0kb upstream 11911 true Chr16: 36292667-36304577 Glycine max
Glyma.16G201400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36292667-36302666 Glycine max
Glyma.16G201400 10.0kb downstream 10.0kb downstream 11911 true Chr16: 36302667-36314577 Glycine max
Glyma.16G201400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36304578-36314577 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314557 5265 Fabidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0157317 0.0 0.0711467 Low Low
cufflinks 0.119152 0.0 0.472506 Low  
cufflinks 0.0567696 0.0 0.231862 Low  
cufflinks 0.114957 0.0 0.45619 Low  
cufflinks 13.5621 0.0 36.7184   High
cufflinks 15.5931 0.0 41.9117   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.303601 0.0 1.15982    
cufflinks 5.47566 0.0 16.1563    
cufflinks 1.438        
cufflinks 0.516        
cufflinks 0.091     Low  
cufflinks 18.231     High High
cufflinks 15.186     High High
cufflinks 0.264        
cufflinks 0.078     Low  
cufflinks 2.549        
cufflinks 0.145        
cufflinks 0.036     Low Low
cufflinks 0.119        
cufflinks 1.206        
cufflinks 0.058     Low Low
cufflinks 0.06     Low Low
cufflinks 0.703        
cufflinks 0.109        
cufflinks 2.585        

0 Strain