Gene : Glyma.16G202700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11759:SF8 - 30S RIBOSOMAL PROTEIN S11-RELATED Genomic Order:  2027
Name:  ? Glyma.16G202700 Secondary Identifier:  ? PAC:30559586
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G202700 0.5kb upstream 0.5kb upstream 2788 true Chr16: 36400257-36403044 Glycine max
Glyma.16G202700 0.5kb upstream 0.5kb upstream 500 false Chr16: 36400257-36400756 Glycine max
Glyma.16G202700 0.5kb downstream 0.5kb downstream 2788 true Chr16: 36400757-36403544 Glycine max
Glyma.16G202700 0.5kb downstream 0.5kb downstream 500 false Chr16: 36403045-36403544 Glycine max
Glyma.16G202700 1.0kb upstream 1.0kb upstream 3288 true Chr16: 36399757-36403044 Glycine max
Glyma.16G202700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36399757-36400756 Glycine max
Glyma.16G202700 1.0kb downstream 1.0kb downstream 3288 true Chr16: 36400757-36404044 Glycine max
Glyma.16G202700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36403045-36404044 Glycine max
Glyma.16G202700 2.0kb upstream 2.0kb upstream 4288 true Chr16: 36398757-36403044 Glycine max
Glyma.16G202700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36398757-36400756 Glycine max
Glyma.16G202700 2.0kb downstream 2.0kb downstream 4288 true Chr16: 36400757-36405044 Glycine max
Glyma.16G202700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36403045-36405044 Glycine max
Glyma.16G202700 5.0kb upstream 5.0kb upstream 7288 true Chr16: 36395757-36403044 Glycine max
Glyma.16G202700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36395757-36400756 Glycine max
Glyma.16G202700 5.0kb downstream 5.0kb downstream 7288 true Chr16: 36400757-36408044 Glycine max
Glyma.16G202700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36403045-36408044 Glycine max
Glyma.16G202700 10.0kb upstream 10.0kb upstream 12288 true Chr16: 36390757-36403044 Glycine max
Glyma.16G202700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36390757-36400756 Glycine max
Glyma.16G202700 10.0kb downstream 10.0kb downstream 12288 true Chr16: 36400757-36413044 Glycine max
Glyma.16G202700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36403045-36413044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311415 5265 Fabidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2117 0.0 56.5851    
cufflinks 12.914 0.0 45.8186    
cufflinks 6.15277 0.0 25.3067   Low
cufflinks 8.52689 0.0 32.6785   Low
cufflinks 17.142 0.0 59.1156   High
cufflinks 13.3459 0.0 40.8466    
cufflinks 13.7023 0.0 48.3412    
cufflinks 11.1252 0.0 41.4656    
cufflinks 12.2395 0.0 44.8181    
cufflinks 3.498        
cufflinks 1.173       Low
cufflinks 3.376        
cufflinks 7.298     High High
cufflinks 9.378     High High
cufflinks 1.468       Low
cufflinks 3.669        
cufflinks 1.567       Low
cufflinks 3.665        
cufflinks 4.835        
cufflinks 3.531        
cufflinks 1.878        
cufflinks 3.814        
cufflinks 4.937        
cufflinks 1.705       Low
cufflinks 3.6        
cufflinks 1.732        

0 Strain