Gene : Glyma.16G204000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  2040
Name:  ? Glyma.16G204000 Secondary Identifier:  ? PAC:30559527
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G204000 0.5kb upstream 0.5kb upstream 4541 true Chr16: 36507514-36512054 Glycine max
Glyma.16G204000 0.5kb upstream 0.5kb upstream 500 false Chr16: 36511555-36512054 Glycine max
Glyma.16G204000 0.5kb downstream 0.5kb downstream 4541 true Chr16: 36507014-36511554 Glycine max
Glyma.16G204000 0.5kb downstream 0.5kb downstream 500 false Chr16: 36507014-36507513 Glycine max
Glyma.16G204000 1.0kb upstream 1.0kb upstream 5041 true Chr16: 36507514-36512554 Glycine max
Glyma.16G204000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36511555-36512554 Glycine max
Glyma.16G204000 1.0kb downstream 1.0kb downstream 5041 true Chr16: 36506514-36511554 Glycine max
Glyma.16G204000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36506514-36507513 Glycine max
Glyma.16G204000 2.0kb upstream 2.0kb upstream 6041 true Chr16: 36507514-36513554 Glycine max
Glyma.16G204000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36511555-36513554 Glycine max
Glyma.16G204000 2.0kb downstream 2.0kb downstream 6041 true Chr16: 36505514-36511554 Glycine max
Glyma.16G204000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36505514-36507513 Glycine max
Glyma.16G204000 5.0kb upstream 5.0kb upstream 9041 true Chr16: 36507514-36516554 Glycine max
Glyma.16G204000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36511555-36516554 Glycine max
Glyma.16G204000 5.0kb downstream 5.0kb downstream 9041 true Chr16: 36502514-36511554 Glycine max
Glyma.16G204000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36502514-36507513 Glycine max
Glyma.16G204000 10.0kb upstream 10.0kb upstream 14041 true Chr16: 36507514-36521554 Glycine max
Glyma.16G204000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36511555-36521554 Glycine max
Glyma.16G204000 10.0kb downstream 10.0kb downstream 14041 true Chr16: 36497514-36511554 Glycine max
Glyma.16G204000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36497514-36507513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313551 5265 Fabidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.3588 0.0 83.756 High High
cufflinks 18.2258 0.0 48.9766    
cufflinks 6.40205 0.0 18.8971   Low
cufflinks 16.1906 0.0 43.7367    
cufflinks 14.4885 0.0 39.4133    
cufflinks 8.23535 0.0 23.5481   Low
cufflinks 15.4162 0.0 41.7831    
cufflinks 17.8341 0.0 47.9407    
cufflinks 9.06139 0.0 25.6235    
cufflinks 5.454        
cufflinks 0.415       Low
cufflinks 2.806        
cufflinks 4.127        
cufflinks 4.019        
cufflinks 1.242        
cufflinks 6.655        
cufflinks 1.37        
cufflinks 3.531        
cufflinks 5.375        
cufflinks 5.542        
cufflinks 0.682       Low
cufflinks 5.48        
cufflinks 7.08       High
cufflinks 0.556       Low
cufflinks 5.939        
cufflinks 1.058        

0 Strain