Gene : Glyma.16G204100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  2041
Name:  ? Glyma.16G204100 Secondary Identifier:  ? PAC:30561024
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G204100 0.5kb upstream 0.5kb upstream 4710 true Chr16: 36513142-36517851 Glycine max
Glyma.16G204100 0.5kb upstream 0.5kb upstream 500 false Chr16: 36517352-36517851 Glycine max
Glyma.16G204100 0.5kb downstream 0.5kb downstream 4710 true Chr16: 36512642-36517351 Glycine max
Glyma.16G204100 0.5kb downstream 0.5kb downstream 500 false Chr16: 36512642-36513141 Glycine max
Glyma.16G204100 1.0kb upstream 1.0kb upstream 5210 true Chr16: 36513142-36518351 Glycine max
Glyma.16G204100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36517352-36518351 Glycine max
Glyma.16G204100 1.0kb downstream 1.0kb downstream 5210 true Chr16: 36512142-36517351 Glycine max
Glyma.16G204100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36512142-36513141 Glycine max
Glyma.16G204100 2.0kb upstream 2.0kb upstream 6210 true Chr16: 36513142-36519351 Glycine max
Glyma.16G204100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36517352-36519351 Glycine max
Glyma.16G204100 2.0kb downstream 2.0kb downstream 6210 true Chr16: 36511142-36517351 Glycine max
Glyma.16G204100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36511142-36513141 Glycine max
Glyma.16G204100 5.0kb upstream 5.0kb upstream 9210 true Chr16: 36513142-36522351 Glycine max
Glyma.16G204100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36517352-36522351 Glycine max
Glyma.16G204100 5.0kb downstream 5.0kb downstream 9210 true Chr16: 36508142-36517351 Glycine max
Glyma.16G204100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36508142-36513141 Glycine max
Glyma.16G204100 10.0kb upstream 10.0kb upstream 14210 true Chr16: 36513142-36527351 Glycine max
Glyma.16G204100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36517352-36527351 Glycine max
Glyma.16G204100 10.0kb downstream 10.0kb downstream 14210 true Chr16: 36503142-36517351 Glycine max
Glyma.16G204100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36503142-36513141 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313551 5265 Fabidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8707 0.0 61.2128 High High
cufflinks 14.7971 0.0 40.3866   High
cufflinks 5.45868 0.0 16.6677   Low
cufflinks 9.41286 0.0 26.7587    
cufflinks 7.53566 0.0 22.04    
cufflinks 8.30295 0.0 23.9879    
cufflinks 7.19173 0.0 21.1669    
cufflinks 10.1847 0.0 28.6493    
cufflinks 5.63673 0.0 17.1295   Low
cufflinks 2.98        
cufflinks 0.803       Low
cufflinks 2.038        
cufflinks 1.832        
cufflinks 1.659        
cufflinks 0.918       Low
cufflinks 9.051     High High
cufflinks 1.272        
cufflinks 1.803        
cufflinks 3.626        
cufflinks 8.797     High High
cufflinks 0.824       Low
cufflinks 8.052     High High
cufflinks 9.168     High High
cufflinks 1.201        
cufflinks 9.415     High High
cufflinks 1.116        

0 Strain