Gene : Glyma.16G204900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  2049
Name:  ? Glyma.16G204900 Secondary Identifier:  ? PAC:30561503
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G204900 0.5kb upstream 0.5kb upstream 2940 true Chr16: 36586222-36589161 Glycine max
Glyma.16G204900 0.5kb upstream 0.5kb upstream 500 false Chr16: 36588662-36589161 Glycine max
Glyma.16G204900 0.5kb downstream 0.5kb downstream 2940 true Chr16: 36585722-36588661 Glycine max
Glyma.16G204900 0.5kb downstream 0.5kb downstream 500 false Chr16: 36585722-36586221 Glycine max
Glyma.16G204900 1.0kb upstream 1.0kb upstream 3440 true Chr16: 36586222-36589661 Glycine max
Glyma.16G204900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36588662-36589661 Glycine max
Glyma.16G204900 1.0kb downstream 1.0kb downstream 3440 true Chr16: 36585222-36588661 Glycine max
Glyma.16G204900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36585222-36586221 Glycine max
Glyma.16G204900 2.0kb upstream 2.0kb upstream 4440 true Chr16: 36586222-36590661 Glycine max
Glyma.16G204900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36588662-36590661 Glycine max
Glyma.16G204900 2.0kb downstream 2.0kb downstream 4440 true Chr16: 36584222-36588661 Glycine max
Glyma.16G204900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36584222-36586221 Glycine max
Glyma.16G204900 5.0kb upstream 5.0kb upstream 7440 true Chr16: 36586222-36593661 Glycine max
Glyma.16G204900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36588662-36593661 Glycine max
Glyma.16G204900 5.0kb downstream 5.0kb downstream 7440 true Chr16: 36581222-36588661 Glycine max
Glyma.16G204900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36581222-36586221 Glycine max
Glyma.16G204900 10.0kb upstream 10.0kb upstream 12440 true Chr16: 36586222-36598661 Glycine max
Glyma.16G204900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36588662-36598661 Glycine max
Glyma.16G204900 10.0kb downstream 10.0kb downstream 12440 true Chr16: 36576222-36588661 Glycine max
Glyma.16G204900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36576222-36586221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305213 5265 Fabidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9274 0.0 101.921 High High
cufflinks 11.3166 0.0 31.2718   Low
cufflinks 29.654 0.0 79.184 High  
cufflinks 24.8599 0.0 66.3305 High  
cufflinks 21.0171 0.0 56.206 High  
cufflinks 35.2905 0.0 94.5905 High High
cufflinks 18.4936 0.0 49.6488    
cufflinks 32.0502 0.0 85.7135 High  
cufflinks 16.5142 0.0 44.5244    
cufflinks 14.91     High High
cufflinks 13.666     High  
cufflinks 11.6     High  
cufflinks 9.329     High  
cufflinks 9.939     High  
cufflinks 13.51     High  
cufflinks 8.839     High  
cufflinks 11.918     High  
cufflinks 7.678     High Low
cufflinks 6.441       Low
cufflinks 9.97     High  
cufflinks 17.935     High High
cufflinks 9.448     High  
cufflinks 10.24     High  
cufflinks 14.196     High  
cufflinks 9.384     High  
cufflinks 15.703     High High

0 Strain